Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abca4O35600 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abca4O35600 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Abca4O35600 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.91■□□□□ 0.3
Abca4O35600 Gm5364-201ENSMUST00000216789 889 ntBASIC16.91■□□□□ 0.3
Abca4O35600 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.9■□□□□ 0.3
Abca4O35600 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abca4O35600 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abca4O35600 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Abca4O35600 Mir5126-201ENSMUST00000175513 77 ntBASIC16.9■□□□□ 0.3
Abca4O35600 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abca4O35600 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abca4O35600 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.9■□□□□ 0.3
Abca4O35600 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abca4O35600 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abca4O35600 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Abca4O35600 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Abca4O35600 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abca4O35600 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Abca4O35600 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abca4O35600 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abca4O35600 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abca4O35600 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abca4O35600 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Abca4O35600 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.89■□□□□ 0.29
Abca4O35600 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Abca4O35600 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.89■□□□□ 0.29
Abca4O35600 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Abca4O35600 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Abca4O35600 Gm10566-201ENSMUST00000086739 996 ntBASIC16.89■□□□□ 0.29
Abca4O35600 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Abca4O35600 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abca4O35600 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Abca4O35600 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Abca4O35600 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Abca4O35600 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abca4O35600 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Abca4O35600 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.88■□□□□ 0.29
Abca4O35600 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abca4O35600 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.88■□□□□ 0.29
Abca4O35600 Mir2861-201ENSMUST00000175539 82 ntBASIC16.88■□□□□ 0.29
Abca4O35600 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Abca4O35600 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Abca4O35600 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abca4O35600 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abca4O35600 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abca4O35600 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abca4O35600 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abca4O35600 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.88■□□□□ 0.29
Abca4O35600 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abca4O35600 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abca4O35600 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abca4O35600 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Abca4O35600 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Abca4O35600 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abca4O35600 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abca4O35600 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Abca4O35600 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abca4O35600 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abca4O35600 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abca4O35600 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Abca4O35600 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abca4O35600 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abca4O35600 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abca4O35600 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abca4O35600 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.87■□□□□ 0.29
Abca4O35600 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abca4O35600 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abca4O35600 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abca4O35600 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Abca4O35600 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abca4O35600 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.86■□□□□ 0.29
Abca4O35600 Gm26039-201ENSMUST00000158152 144 ntBASIC16.86■□□□□ 0.29
Abca4O35600 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abca4O35600 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.86■□□□□ 0.29
Abca4O35600 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abca4O35600 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Abca4O35600 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abca4O35600 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.86■□□□□ 0.29
Abca4O35600 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abca4O35600 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Abca4O35600 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.86■□□□□ 0.29
Abca4O35600 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abca4O35600 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abca4O35600 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Abca4O35600 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abca4O35600 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abca4O35600 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Abca4O35600 Gm2213-201ENSMUST00000197485 688 ntBASIC16.85■□□□□ 0.29
Abca4O35600 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.85■□□□□ 0.29
Abca4O35600 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.85■□□□□ 0.29
Abca4O35600 Mir770-201ENSMUST00000103252 94 ntBASIC16.85■□□□□ 0.29
Abca4O35600 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Abca4O35600 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abca4O35600 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abca4O35600 Gm8000-201ENSMUST00000188378 592 ntBASIC16.85■□□□□ 0.29
Abca4O35600 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abca4O35600 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abca4O35600 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abca4O35600 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms