Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Gm7514-201ENSMUST00000209475 934 ntBASIC19.15■□□□□ 0.66
Cpsf2O35218 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf2O35218 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf2O35218 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf2O35218 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf2O35218 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf2O35218 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf2O35218 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf2O35218 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cpsf2O35218 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.14■□□□□ 0.66
Cpsf2O35218 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf2O35218 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
Cpsf2O35218 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf2O35218 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf2O35218 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf2O35218 Gm10033-202ENSMUST00000211874 928 ntBASIC19.14■□□□□ 0.65
Cpsf2O35218 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.14■□□□□ 0.65
Cpsf2O35218 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf2O35218 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf2O35218 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.14■□□□□ 0.65
Cpsf2O35218 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf2O35218 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf2O35218 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf2O35218 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf2O35218 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf2O35218 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf2O35218 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf2O35218 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Cpsf2O35218 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.13■□□□□ 0.65
Cpsf2O35218 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf2O35218 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf2O35218 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cpsf2O35218 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf2O35218 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cpsf2O35218 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cpsf2O35218 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.12■□□□□ 0.65
Cpsf2O35218 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf2O35218 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf2O35218 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cpsf2O35218 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.12■□□□□ 0.65
Cpsf2O35218 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf2O35218 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf2O35218 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf2O35218 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.12■□□□□ 0.65
Cpsf2O35218 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.12■□□□□ 0.65
Cpsf2O35218 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf2O35218 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.12■□□□□ 0.65
Cpsf2O35218 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf2O35218 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf2O35218 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf2O35218 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf2O35218 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
Cpsf2O35218 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf2O35218 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf2O35218 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.11■□□□□ 0.65
Cpsf2O35218 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf2O35218 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf2O35218 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf2O35218 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf2O35218 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf2O35218 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf2O35218 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf2O35218 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.11■□□□□ 0.65
Cpsf2O35218 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
Cpsf2O35218 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.11■□□□□ 0.65
Cpsf2O35218 Gm42642-201ENSMUST00000200683 355 ntBASIC19.11■□□□□ 0.65
Cpsf2O35218 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf2O35218 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf2O35218 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf2O35218 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf2O35218 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf2O35218 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf2O35218 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cpsf2O35218 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf2O35218 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cpsf2O35218 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf2O35218 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Cpsf2O35218 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf2O35218 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf2O35218 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.1■□□□□ 0.65
Cpsf2O35218 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf2O35218 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf2O35218 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf2O35218 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cpsf2O35218 Gm18671-201ENSMUST00000214826 683 ntBASIC19.1■□□□□ 0.65
Cpsf2O35218 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf2O35218 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Cpsf2O35218 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf2O35218 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf2O35218 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cpsf2O35218 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf2O35218 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Cpsf2O35218 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf2O35218 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf2O35218 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf2O35218 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf2O35218 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf2O35218 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf2O35218 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf2O35218 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms