Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trove2O08848 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Trove2O08848 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Trove2O08848 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trove2O08848 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Trove2O08848 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trove2O08848 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.39■□□□□ 0.53
Trove2O08848 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trove2O08848 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trove2O08848 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
Trove2O08848 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trove2O08848 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trove2O08848 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trove2O08848 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trove2O08848 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trove2O08848 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trove2O08848 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trove2O08848 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trove2O08848 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trove2O08848 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Trove2O08848 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trove2O08848 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trove2O08848 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trove2O08848 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trove2O08848 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trove2O08848 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trove2O08848 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trove2O08848 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trove2O08848 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trove2O08848 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trove2O08848 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Trove2O08848 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trove2O08848 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.37■□□□□ 0.53
Trove2O08848 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.37■□□□□ 0.53
Trove2O08848 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Trove2O08848 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.37■□□□□ 0.53
Trove2O08848 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trove2O08848 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.37■□□□□ 0.53
Trove2O08848 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trove2O08848 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.37■□□□□ 0.53
Trove2O08848 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trove2O08848 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Trove2O08848 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
Trove2O08848 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.36■□□□□ 0.53
Trove2O08848 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Trove2O08848 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.36■□□□□ 0.53
Trove2O08848 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Trove2O08848 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.36■□□□□ 0.53
Trove2O08848 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.36■□□□□ 0.53
Trove2O08848 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trove2O08848 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trove2O08848 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trove2O08848 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trove2O08848 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trove2O08848 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trove2O08848 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trove2O08848 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trove2O08848 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trove2O08848 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trove2O08848 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trove2O08848 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trove2O08848 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trove2O08848 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.35■□□□□ 0.53
Trove2O08848 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.35■□□□□ 0.53
Trove2O08848 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.35■□□□□ 0.53
Trove2O08848 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms