Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.6■□□□□ 0.57
Ebf3O08791 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ebf3O08791 Gm11643-201ENSMUST00000119578 864 ntBASIC18.6■□□□□ 0.57
Ebf3O08791 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.6■□□□□ 0.57
Ebf3O08791 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf3O08791 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf3O08791 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf3O08791 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf3O08791 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.59■□□□□ 0.57
Ebf3O08791 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ebf3O08791 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf3O08791 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf3O08791 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf3O08791 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf3O08791 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.59■□□□□ 0.57
Ebf3O08791 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf3O08791 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf3O08791 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Ebf3O08791 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf3O08791 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf3O08791 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ebf3O08791 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ebf3O08791 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ebf3O08791 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ebf3O08791 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ebf3O08791 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ebf3O08791 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ebf3O08791 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ebf3O08791 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ebf3O08791 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Ebf3O08791 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.58■□□□□ 0.56
Ebf3O08791 Gm43183-201ENSMUST00000200632 547 ntBASIC18.58■□□□□ 0.56
Ebf3O08791 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ebf3O08791 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ebf3O08791 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ebf3O08791 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ebf3O08791 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ebf3O08791 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.58■□□□□ 0.56
Ebf3O08791 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ebf3O08791 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Ebf3O08791 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ebf3O08791 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ebf3O08791 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ebf3O08791 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ebf3O08791 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ebf3O08791 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ebf3O08791 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.57■□□□□ 0.56
Ebf3O08791 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.57■□□□□ 0.56
Ebf3O08791 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ebf3O08791 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ebf3O08791 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ebf3O08791 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.57■□□□□ 0.56
Ebf3O08791 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ebf3O08791 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.57■□□□□ 0.56
Ebf3O08791 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ebf3O08791 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Ebf3O08791 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ebf3O08791 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf3O08791 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ebf3O08791 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf3O08791 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf3O08791 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf3O08791 Gm10138-203ENSMUST00000206952 366 ntBASIC18.56■□□□□ 0.56
Ebf3O08791 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf3O08791 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf3O08791 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf3O08791 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf3O08791 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf3O08791 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf3O08791 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf3O08791 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Ebf3O08791 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf3O08791 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf3O08791 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ebf3O08791 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.55■□□□□ 0.56
Ebf3O08791 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Ebf3O08791 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.55■□□□□ 0.56
Ebf3O08791 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.55■□□□□ 0.56
Ebf3O08791 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.55■□□□□ 0.56
Ebf3O08791 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf3O08791 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ebf3O08791 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms