Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TprF6ZDS4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TprF6ZDS4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TprF6ZDS4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.44■□□□□ 0.22
TprF6ZDS4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TprF6ZDS4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TprF6ZDS4 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.44■□□□□ 0.22
TprF6ZDS4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TprF6ZDS4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.44■□□□□ 0.22
TprF6ZDS4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TprF6ZDS4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TprF6ZDS4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TprF6ZDS4 Mir6349-201ENSMUST00000184059 97 ntBASIC16.44■□□□□ 0.22
TprF6ZDS4 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.44■□□□□ 0.22
TprF6ZDS4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TprF6ZDS4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TprF6ZDS4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TprF6ZDS4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TprF6ZDS4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TprF6ZDS4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TprF6ZDS4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TprF6ZDS4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.43■□□□□ 0.22
TprF6ZDS4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TprF6ZDS4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TprF6ZDS4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TprF6ZDS4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TprF6ZDS4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TprF6ZDS4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.43■□□□□ 0.22
TprF6ZDS4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TprF6ZDS4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TprF6ZDS4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TprF6ZDS4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TprF6ZDS4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TprF6ZDS4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.42■□□□□ 0.22
TprF6ZDS4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TprF6ZDS4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TprF6ZDS4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TprF6ZDS4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TprF6ZDS4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
TprF6ZDS4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TprF6ZDS4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TprF6ZDS4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TprF6ZDS4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
TprF6ZDS4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TprF6ZDS4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TprF6ZDS4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TprF6ZDS4 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.41■□□□□ 0.22
TprF6ZDS4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TprF6ZDS4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TprF6ZDS4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TprF6ZDS4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TprF6ZDS4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TprF6ZDS4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TprF6ZDS4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TprF6ZDS4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TprF6ZDS4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TprF6ZDS4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.41■□□□□ 0.22
TprF6ZDS4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.41■□□□□ 0.22
TprF6ZDS4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TprF6ZDS4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TprF6ZDS4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TprF6ZDS4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TprF6ZDS4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TprF6ZDS4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TprF6ZDS4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TprF6ZDS4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TprF6ZDS4 Gm18959-201ENSMUST00000208954 655 ntBASIC16.4■□□□□ 0.22
TprF6ZDS4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TprF6ZDS4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TprF6ZDS4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TprF6ZDS4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TprF6ZDS4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TprF6ZDS4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TprF6ZDS4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TprF6ZDS4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TprF6ZDS4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TprF6ZDS4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TprF6ZDS4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.4■□□□□ 0.22
TprF6ZDS4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TprF6ZDS4 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.4■□□□□ 0.22
TprF6ZDS4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TprF6ZDS4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TprF6ZDS4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TprF6ZDS4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TprF6ZDS4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TprF6ZDS4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TprF6ZDS4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.39■□□□□ 0.21
TprF6ZDS4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TprF6ZDS4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TprF6ZDS4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TprF6ZDS4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TprF6ZDS4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TprF6ZDS4 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.39■□□□□ 0.21
TprF6ZDS4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TprF6ZDS4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TprF6ZDS4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TprF6ZDS4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TprF6ZDS4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TprF6ZDS4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TprF6ZDS4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms