Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atf6F6VAN0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atf6F6VAN0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Atf6F6VAN0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atf6F6VAN0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atf6F6VAN0 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.42■□□□□ 0.54
Atf6F6VAN0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.42■□□□□ 0.54
Atf6F6VAN0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atf6F6VAN0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Atf6F6VAN0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Atf6F6VAN0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atf6F6VAN0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atf6F6VAN0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Atf6F6VAN0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atf6F6VAN0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.42■□□□□ 0.54
Atf6F6VAN0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf6F6VAN0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf6F6VAN0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf6F6VAN0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Atf6F6VAN0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf6F6VAN0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.41■□□□□ 0.54
Atf6F6VAN0 Gm12933-201ENSMUST00000120203 872 ntBASIC18.41■□□□□ 0.54
Atf6F6VAN0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Atf6F6VAN0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf6F6VAN0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf6F6VAN0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Atf6F6VAN0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf6F6VAN0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf6F6VAN0 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.41■□□□□ 0.54
Atf6F6VAN0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Atf6F6VAN0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf6F6VAN0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf6F6VAN0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf6F6VAN0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf6F6VAN0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf6F6VAN0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6F6VAN0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6F6VAN0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6F6VAN0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6F6VAN0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6F6VAN0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6F6VAN0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.4■□□□□ 0.54
Atf6F6VAN0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6F6VAN0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6F6VAN0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6F6VAN0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6F6VAN0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6F6VAN0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.4■□□□□ 0.54
Atf6F6VAN0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6F6VAN0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6F6VAN0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf6F6VAN0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf6F6VAN0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf6F6VAN0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Atf6F6VAN0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Atf6F6VAN0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf6F6VAN0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf6F6VAN0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.39■□□□□ 0.53
Atf6F6VAN0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf6F6VAN0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf6F6VAN0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.39■□□□□ 0.53
Atf6F6VAN0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf6F6VAN0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf6F6VAN0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Gm2399-201ENSMUST00000104944 225 ntBASIC18.38■□□□□ 0.53
Atf6F6VAN0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Rab3c-203ENSMUST00000224180 967 ntBASIC18.38■□□□□ 0.53
Atf6F6VAN0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Atf6F6VAN0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6F6VAN0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6F6VAN0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6F6VAN0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Atf6F6VAN0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf6F6VAN0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Atf6F6VAN0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Atf6F6VAN0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf6F6VAN0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf6F6VAN0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.37■□□□□ 0.53
Atf6F6VAN0 Gm5408-201ENSMUST00000197998 747 ntBASIC18.37■□□□□ 0.53
Atf6F6VAN0 Gm44549-201ENSMUST00000208351 577 ntBASIC18.37■□□□□ 0.53
Atf6F6VAN0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms