Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4lE9Q2N0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.19■□□□□ 0.02
Cpsf4lE9Q2N0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4lE9Q2N0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4lE9Q2N0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4lE9Q2N0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4lE9Q2N0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4lE9Q2N0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4lE9Q2N0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4lE9Q2N0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4lE9Q2N0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4lE9Q2N0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.19■□□□□ 0.02
Cpsf4lE9Q2N0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cpsf4lE9Q2N0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4lE9Q2N0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4lE9Q2N0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.19■□□□□ 0.02
Cpsf4lE9Q2N0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4lE9Q2N0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4lE9Q2N0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cpsf4lE9Q2N0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4lE9Q2N0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4lE9Q2N0 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.17■□□□□ 0.02
Cpsf4lE9Q2N0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cpsf4lE9Q2N0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.17■□□□□ 0.02
Cpsf4lE9Q2N0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4lE9Q2N0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4lE9Q2N0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4lE9Q2N0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4lE9Q2N0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4lE9Q2N0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4lE9Q2N0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4lE9Q2N0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4lE9Q2N0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4lE9Q2N0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4lE9Q2N0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4lE9Q2N0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.16■□□□□ 0.02
Cpsf4lE9Q2N0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4lE9Q2N0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4lE9Q2N0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cpsf4lE9Q2N0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4lE9Q2N0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.16■□□□□ 0.02
Cpsf4lE9Q2N0 Trmt13-210ENSMUST00000198454 880 ntBASIC15.16■□□□□ 0.02
Cpsf4lE9Q2N0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4lE9Q2N0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4lE9Q2N0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4lE9Q2N0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4lE9Q2N0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cpsf4lE9Q2N0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cpsf4lE9Q2N0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4lE9Q2N0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
Cpsf4lE9Q2N0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4lE9Q2N0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cpsf4lE9Q2N0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4lE9Q2N0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4lE9Q2N0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.15■□□□□ 0.02
Cpsf4lE9Q2N0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4lE9Q2N0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4lE9Q2N0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.15■□□□□ 0.02
Cpsf4lE9Q2N0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4lE9Q2N0 Gm10653-202ENSMUST00000139570 835 ntBASIC15.15■□□□□ 0.02
Cpsf4lE9Q2N0 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.15■□□□□ 0.02
Cpsf4lE9Q2N0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.15■□□□□ 0.02
Cpsf4lE9Q2N0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4lE9Q2N0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4lE9Q2N0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4lE9Q2N0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4lE9Q2N0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4lE9Q2N0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpsf4lE9Q2N0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4lE9Q2N0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms