Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.18■□□□□ 0.66
Sh2d4bA6X942 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4bA6X942 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4bA6X942 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4bA6X942 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4bA6X942 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Sh2d4bA6X942 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4bA6X942 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4bA6X942 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Sh2d4bA6X942 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Sh2d4bA6X942 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4bA6X942 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4bA6X942 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4bA6X942 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4bA6X942 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4bA6X942 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4bA6X942 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d4bA6X942 Golph3-205ENSMUST00000228671 2842 ntBASIC19.16■□□□□ 0.66
Sh2d4bA6X942 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d4bA6X942 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Sh2d4bA6X942 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d4bA6X942 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d4bA6X942 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d4bA6X942 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d4bA6X942 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d4bA6X942 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d4bA6X942 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d4bA6X942 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.16■□□□□ 0.66
Sh2d4bA6X942 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Sh2d4bA6X942 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d4bA6X942 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d4bA6X942 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d4bA6X942 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Sh2d4bA6X942 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
Sh2d4bA6X942 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d4bA6X942 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Sh2d4bA6X942 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.15■□□□□ 0.66
Sh2d4bA6X942 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.15■□□□□ 0.66
Sh2d4bA6X942 Gm21362-201ENSMUST00000194272 928 ntBASIC19.15■□□□□ 0.66
Sh2d4bA6X942 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.15■□□□□ 0.66
Sh2d4bA6X942 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d4bA6X942 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d4bA6X942 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Sh2d4bA6X942 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d4bA6X942 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d4bA6X942 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d4bA6X942 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.15■□□□□ 0.66
Sh2d4bA6X942 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d4bA6X942 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d4bA6X942 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4bA6X942 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4bA6X942 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4bA6X942 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4bA6X942 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4bA6X942 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4bA6X942 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4bA6X942 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4bA6X942 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4bA6X942 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4bA6X942 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4bA6X942 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4bA6X942 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh2d4bA6X942 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.13■□□□□ 0.65
Sh2d4bA6X942 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh2d4bA6X942 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.13■□□□□ 0.65
Sh2d4bA6X942 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sh2d4bA6X942 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh2d4bA6X942 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh2d4bA6X942 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh2d4bA6X942 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh2d4bA6X942 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Sh2d4bA6X942 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh2d4bA6X942 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh2d4bA6X942 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.13■□□□□ 0.65
Sh2d4bA6X942 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh2d4bA6X942 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.13■□□□□ 0.65
Sh2d4bA6X942 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh2d4bA6X942 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh2d4bA6X942 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Sh2d4bA6X942 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.12■□□□□ 0.65
Sh2d4bA6X942 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Sh2d4bA6X942 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh2d4bA6X942 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.12■□□□□ 0.65
Sh2d4bA6X942 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.12■□□□□ 0.65
Sh2d4bA6X942 Flg-201ENSMUST00000050758 1488 ntBASIC19.12■□□□□ 0.65
Sh2d4bA6X942 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh2d4bA6X942 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms