Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Krt28A6BLY7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Krt28A6BLY7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt28A6BLY7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.93■□□□□ 0.78
Krt28A6BLY7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Krt28A6BLY7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt28A6BLY7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt28A6BLY7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt28A6BLY7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.93■□□□□ 0.78
Krt28A6BLY7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt28A6BLY7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt28A6BLY7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt28A6BLY7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt28A6BLY7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Krt28A6BLY7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt28A6BLY7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt28A6BLY7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Krt28A6BLY7 Gm7638-201ENSMUST00000121348 967 ntBASIC19.92■□□□□ 0.78
Krt28A6BLY7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.92■□□□□ 0.78
Krt28A6BLY7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.92■□□□□ 0.78
Krt28A6BLY7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Krt28A6BLY7 Mir1668-201ENSMUST00000184114 107 ntBASIC19.92■□□□□ 0.78
Krt28A6BLY7 Gm7791-201ENSMUST00000219066 539 ntBASIC19.92■□□□□ 0.78
Krt28A6BLY7 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.92■□□□□ 0.78
Krt28A6BLY7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Krt28A6BLY7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt28A6BLY7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt28A6BLY7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.92■□□□□ 0.78
Krt28A6BLY7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt28A6BLY7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt28A6BLY7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Krt28A6BLY7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt28A6BLY7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
Krt28A6BLY7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt28A6BLY7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt28A6BLY7 Gm17808-201ENSMUST00000200859 894 ntBASIC19.91■□□□□ 0.78
Krt28A6BLY7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.91■□□□□ 0.78
Krt28A6BLY7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt28A6BLY7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Krt28A6BLY7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Krt28A6BLY7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt28A6BLY7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Krt28A6BLY7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt28A6BLY7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Krt28A6BLY7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt28A6BLY7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt28A6BLY7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Krt28A6BLY7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt28A6BLY7 Gm18958-201ENSMUST00000174258 762 ntBASIC19.9■□□□□ 0.78
Krt28A6BLY7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Krt28A6BLY7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt28A6BLY7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt28A6BLY7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt28A6BLY7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.9■□□□□ 0.78
Krt28A6BLY7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt28A6BLY7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Krt28A6BLY7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Krt28A6BLY7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Krt28A6BLY7 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.89■□□□□ 0.77
Krt28A6BLY7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Krt28A6BLY7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Krt28A6BLY7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Krt28A6BLY7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Krt28A6BLY7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Krt28A6BLY7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.89■□□□□ 0.77
Krt28A6BLY7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Krt28A6BLY7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Krt28A6BLY7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.89■□□□□ 0.77
Krt28A6BLY7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Krt28A6BLY7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt28A6BLY7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Krt28A6BLY7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.88■□□□□ 0.77
Krt28A6BLY7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt28A6BLY7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt28A6BLY7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt28A6BLY7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Krt28A6BLY7 Gm7370-201ENSMUST00000219471 767 ntBASIC19.88■□□□□ 0.77
Krt28A6BLY7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt28A6BLY7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt28A6BLY7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt28A6BLY7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Krt28A6BLY7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt28A6BLY7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt28A6BLY7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt28A6BLY7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt28A6BLY7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.87■□□□□ 0.77
Krt28A6BLY7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Krt28A6BLY7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Krt28A6BLY7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Krt28A6BLY7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Krt28A6BLY7 Golph3-202ENSMUST00000226517 2359 ntBASIC19.87■□□□□ 0.77
Krt28A6BLY7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt28A6BLY7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Krt28A6BLY7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt28A6BLY7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.86■□□□□ 0.77
Krt28A6BLY7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt28A6BLY7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt28A6BLY7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Krt28A6BLY7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Krt28A6BLY7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms