Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Chchd1-203ENSMUST00000224633 557 ntBASIC9.53□□□□□ -0.88
Ubr4A2AN08 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ubr4A2AN08 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ubr4A2AN08 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC9.53□□□□□ -0.88
Ubr4A2AN08 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ubr4A2AN08 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC9.52□□□□□ -0.88
Ubr4A2AN08 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Ubr4A2AN08 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Ubr4A2AN08 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Ubr4A2AN08 Gm14701-201ENSMUST00000117156 348 ntBASIC9.52□□□□□ -0.89
Ubr4A2AN08 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Gm5648-201ENSMUST00000122244 1587 ntBASIC9.52□□□□□ -0.89
Ubr4A2AN08 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Gm25911-201ENSMUST00000157621 56 ntBASIC9.52□□□□□ -0.89
Ubr4A2AN08 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ubr4A2AN08 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC9.52□□□□□ -0.89
Ubr4A2AN08 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC9.52□□□□□ -0.89
Ubr4A2AN08 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ubr4A2AN08 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ubr4A2AN08 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ubr4A2AN08 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Ubr4A2AN08 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ubr4A2AN08 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ubr4A2AN08 Mir3102-201ENSMUST00000175555 104 ntBASIC9.51□□□□□ -0.89
Ubr4A2AN08 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ubr4A2AN08 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Ubr4A2AN08 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Ubr4A2AN08 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ubr4A2AN08 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ubr4A2AN08 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC9.51□□□□□ -0.89
Ubr4A2AN08 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ubr4A2AN08 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ubr4A2AN08 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ubr4A2AN08 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ubr4A2AN08 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ubr4A2AN08 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC9.51□□□□□ -0.89
Ubr4A2AN08 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ubr4A2AN08 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC9.51□□□□□ -0.89
Ubr4A2AN08 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ubr4A2AN08 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ubr4A2AN08 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ubr4A2AN08 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Mir770-201ENSMUST00000103252 94 ntBASIC9.5□□□□□ -0.89
Ubr4A2AN08 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC9.5□□□□□ -0.89
Ubr4A2AN08 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ubr4A2AN08 Gm9727-201ENSMUST00000161387 555 ntBASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms