Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smim17A0A504 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smim17A0A504 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smim17A0A504 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smim17A0A504 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smim17A0A504 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.3■□□□□ 0.2
Smim17A0A504 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smim17A0A504 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smim17A0A504 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.29■□□□□ 0.2
Smim17A0A504 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smim17A0A504 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smim17A0A504 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.29■□□□□ 0.2
Smim17A0A504 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Smim17A0A504 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Smim17A0A504 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.29■□□□□ 0.2
Smim17A0A504 Gm40881-201ENSMUST00000223397 166 ntBASIC16.29■□□□□ 0.2
Smim17A0A504 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Smim17A0A504 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smim17A0A504 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.29■□□□□ 0.2
Smim17A0A504 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smim17A0A504 Dancr-204ENSMUST00000132389 2347 ntBASIC16.29■□□□□ 0.2
Smim17A0A504 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smim17A0A504 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smim17A0A504 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim17A0A504 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smim17A0A504 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smim17A0A504 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim17A0A504 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim17A0A504 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim17A0A504 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.28■□□□□ 0.2
Smim17A0A504 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smim17A0A504 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim17A0A504 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim17A0A504 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim17A0A504 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Smim17A0A504 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.28■□□□□ 0.2
Smim17A0A504 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim17A0A504 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim17A0A504 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim17A0A504 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Smim17A0A504 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Smim17A0A504 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim17A0A504 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
Smim17A0A504 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim17A0A504 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Smim17A0A504 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim17A0A504 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim17A0A504 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smim17A0A504 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim17A0A504 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim17A0A504 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim17A0A504 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smim17A0A504 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smim17A0A504 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Smim17A0A504 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smim17A0A504 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smim17A0A504 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smim17A0A504 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Smim17A0A504 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.27■□□□□ 0.19
Smim17A0A504 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Smim17A0A504 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Smim17A0A504 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.26■□□□□ 0.19
Smim17A0A504 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.26■□□□□ 0.19
Smim17A0A504 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Smim17A0A504 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.26■□□□□ 0.19
Smim17A0A504 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim17A0A504 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim17A0A504 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim17A0A504 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim17A0A504 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Smim17A0A504 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim17A0A504 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim17A0A504 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.25■□□□□ 0.19
Smim17A0A504 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim17A0A504 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smim17A0A504 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.25■□□□□ 0.19
Smim17A0A504 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Smim17A0A504 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smim17A0A504 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim17A0A504 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim17A0A504 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Smim17A0A504 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim17A0A504 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms