Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 Gm5898-201ENSMUST00000121016 2071 ntBASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 Ddx41-204ENSMUST00000224765 2199 ntBASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Igkv3-4A0A140T8Q4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-4A0A140T8Q4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 Gm7160-202ENSMUST00000188519 1027 ntBASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-4A0A140T8Q4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Gm12922-201ENSMUST00000120626 809 ntBASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv3-4A0A140T8Q4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv3-4A0A140T8Q4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv3-4A0A140T8Q4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv3-4A0A140T8Q4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv3-4A0A140T8Q4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv3-4A0A140T8Q4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv3-4A0A140T8Q4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC11.22□□□□□ -0.61
Igkv3-4A0A140T8Q4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Igkv3-4A0A140T8Q4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv3-4A0A140T8Q4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms