Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 Nespas-201ENSMUST00000143738 1083 ntBASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv3-9A0A140T8P4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv3-9A0A140T8P4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv3-9A0A140T8P4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv3-9A0A140T8P4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv3-9A0A140T8P4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv3-9A0A140T8P4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Gm6420-201ENSMUST00000193885 723 ntBASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Gm42642-201ENSMUST00000200683 355 ntBASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv3-9A0A140T8P4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv3-9A0A140T8P4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv3-9A0A140T8P4 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.49□□□□□ -0.41
Igkv3-9A0A140T8P4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv3-9A0A140T8P4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv3-9A0A140T8P4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Igkv3-9A0A140T8P4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv3-9A0A140T8P4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Igkv3-9A0A140T8P4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Igkv3-9A0A140T8P4 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms