Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv2-1A0A0G2JGB9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC13.21□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.21□□□□□ -0.29
Trdv2-1A0A0G2JGB9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trdv2-1A0A0G2JGB9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trdv2-1A0A0G2JGB9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.21□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.21□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.21□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.19□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.19□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv2-1A0A0G2JGB9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.18□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Gm7417-201ENSMUST00000192950 473 ntBASIC13.18□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Gm27045-201ENSMUST00000182145 1402 ntBASIC13.18□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms