Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-27A0A0G2JF28 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Dancr-204ENSMUST00000132389 2347 ntBASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv8-27A0A0G2JF28 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv8-27A0A0G2JF28 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv8-27A0A0G2JF28 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.27□□□□□ -0.6
Igkv8-27A0A0G2JF28 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv8-27A0A0G2JF28 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv8-27A0A0G2JF28 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv8-27A0A0G2JF28 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC11.27□□□□□ -0.61
Igkv8-27A0A0G2JF28 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Igkv8-27A0A0G2JF28 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC11.26□□□□□ -0.61
Igkv8-27A0A0G2JF28 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv8-27A0A0G2JF28 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC11.26□□□□□ -0.61
Igkv8-27A0A0G2JF28 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Igkv8-27A0A0G2JF28 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv8-27A0A0G2JF28 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv8-27A0A0G2JF28 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC11.26□□□□□ -0.61
Igkv8-27A0A0G2JF28 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv8-27A0A0G2JF28 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv8-27A0A0G2JF28 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv8-27A0A0G2JF28 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.26□□□□□ -0.61
Igkv8-27A0A0G2JF28 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Igkv8-27A0A0G2JF28 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv8-27A0A0G2JF28 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv8-27A0A0G2JF28 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Gm26917-202ENSMUST00000192833 3329 ntBASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv8-27A0A0G2JF28 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms