Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gm27275-201ENSMUST00000184318 272 ntBASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gm44549-201ENSMUST00000208351 577 ntBASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Gm10812-201ENSMUST00000099864 546 ntBASIC12.96□□□□□ -0.33
Trav13n-1A0A0G2JEU8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.96□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms