Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav4-3A0A0B4J1K1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-3A0A0B4J1K1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav4-3A0A0B4J1K1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-3A0A0B4J1K1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-3A0A0B4J1K1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-3A0A0B4J1K1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-3A0A0B4J1K1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-3A0A0B4J1K1 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.27□□□□□ -0.45
Trav4-3A0A0B4J1K1 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.27□□□□□ -0.45
Trav4-3A0A0B4J1K1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4-3A0A0B4J1K1 Gm10209-201ENSMUST00000203397 1607 ntBASIC12.26□□□□□ -0.45
Trav4-3A0A0B4J1K1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4-3A0A0B4J1K1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav4-3A0A0B4J1K1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4-3A0A0B4J1K1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4-3A0A0B4J1K1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav4-3A0A0B4J1K1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4-3A0A0B4J1K1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4-3A0A0B4J1K1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav4-3A0A0B4J1K1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4-3A0A0B4J1K1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4-3A0A0B4J1K1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav4-3A0A0B4J1K1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Trav4-3A0A0B4J1K1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4-3A0A0B4J1K1 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.26□□□□□ -0.45
Trav4-3A0A0B4J1K1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4-3A0A0B4J1K1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Gm5921-201ENSMUST00000075898 882 ntBASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4-3A0A0B4J1K1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Mir6538-201ENSMUST00000183713 110 ntBASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav4-3A0A0B4J1K1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-3A0A0B4J1K1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms