Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Gm5643-201ENSMUST00000117081 966 ntBASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Gm10653-202ENSMUST00000139570 835 ntBASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Gm29791-202ENSMUST00000207888 369 ntBASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.85■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv12-1A0A0B4J1H0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trbv12-1A0A0B4J1H0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv12-1A0A0B4J1H0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.84■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.83■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Gm8969-201ENSMUST00000199694 526 ntBASIC15.83■□□□□ 0.12
Trbv12-1A0A0B4J1H0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.83■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.83■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.83■□□□□ 0.12
Trbv12-1A0A0B4J1H0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.83■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv12-1A0A0B4J1H0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms