Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv5A0A0B4J1G9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv5A0A0B4J1G9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv5A0A0B4J1G9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv5A0A0B4J1G9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv5A0A0B4J1G9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv5A0A0B4J1G9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv5A0A0B4J1G9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trbv5A0A0B4J1G9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv5A0A0B4J1G9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv5A0A0B4J1G9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv5A0A0B4J1G9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv5A0A0B4J1G9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv5A0A0B4J1G9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv5A0A0B4J1G9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv5A0A0B4J1G9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv5A0A0B4J1G9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv5A0A0B4J1G9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.44□□□□□ -0.1
Trbv5A0A0B4J1G9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Trbv5A0A0B4J1G9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv5A0A0B4J1G9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv5A0A0B4J1G9 Tgds-204ENSMUST00000228543 1594 ntBASIC14.43□□□□□ -0.1
Trbv5A0A0B4J1G9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv5A0A0B4J1G9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv5A0A0B4J1G9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv5A0A0B4J1G9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv5A0A0B4J1G9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv5A0A0B4J1G9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv5A0A0B4J1G9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv5A0A0B4J1G9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv5A0A0B4J1G9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv5A0A0B4J1G9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv5A0A0B4J1G9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv5A0A0B4J1G9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv5A0A0B4J1G9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.43□□□□□ -0.1
Trbv5A0A0B4J1G9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv5A0A0B4J1G9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trbv5A0A0B4J1G9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms