Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trbv21A0A0A6YX06 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trbv21A0A0A6YX06 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv21A0A0A6YX06 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.62■□□□□ 0.25
Trbv21A0A0A6YX06 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trbv21A0A0A6YX06 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv21A0A0A6YX06 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv21A0A0A6YX06 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv21A0A0A6YX06 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv21A0A0A6YX06 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv21A0A0A6YX06 Idnk-204ENSMUST00000226010 1898 ntBASIC16.61■□□□□ 0.25
Trbv21A0A0A6YX06 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trbv21A0A0A6YX06 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trbv21A0A0A6YX06 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.61■□□□□ 0.25
Trbv21A0A0A6YX06 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.61■□□□□ 0.25
Trbv21A0A0A6YX06 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trbv21A0A0A6YX06 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv21A0A0A6YX06 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv21A0A0A6YX06 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trbv21A0A0A6YX06 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv21A0A0A6YX06 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv21A0A0A6YX06 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv21A0A0A6YX06 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Gm44882-201ENSMUST00000205702 802 ntBASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trbv21A0A0A6YX06 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv21A0A0A6YX06 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv21A0A0A6YX06 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.59■□□□□ 0.25
Trbv21A0A0A6YX06 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trbv21A0A0A6YX06 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv21A0A0A6YX06 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv21A0A0A6YX06 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv21A0A0A6YX06 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv21A0A0A6YX06 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv21A0A0A6YX06 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trbv21A0A0A6YX06 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.59■□□□□ 0.25
Trbv21A0A0A6YX06 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv21A0A0A6YX06 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.58■□□□□ 0.25
Trbv21A0A0A6YX06 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv21A0A0A6YX06 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv21A0A0A6YX06 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv21A0A0A6YX06 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv21A0A0A6YX06 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
Trbv21A0A0A6YX06 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.58■□□□□ 0.24
Trbv21A0A0A6YX06 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Trbv21A0A0A6YX06 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv21A0A0A6YX06 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Trbv21A0A0A6YX06 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.58■□□□□ 0.24
Trbv21A0A0A6YX06 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv21A0A0A6YX06 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv21A0A0A6YX06 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.58■□□□□ 0.24
Trbv21A0A0A6YX06 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv21A0A0A6YX06 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv21A0A0A6YX06 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.58■□□□□ 0.24
Trbv21A0A0A6YX06 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv21A0A0A6YX06 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv21A0A0A6YX06 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv21A0A0A6YX06 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trbv21A0A0A6YX06 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv21A0A0A6YX06 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv21A0A0A6YX06 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv21A0A0A6YX06 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv21A0A0A6YX06 Gm11927-201ENSMUST00000118472 759 ntBASIC16.57■□□□□ 0.24
Trbv21A0A0A6YX06 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trbv21A0A0A6YX06 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.57■□□□□ 0.24
Trbv21A0A0A6YX06 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv21A0A0A6YX06 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.57■□□□□ 0.24
Trbv21A0A0A6YX06 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.57■□□□□ 0.24
Trbv21A0A0A6YX06 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv21A0A0A6YX06 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv21A0A0A6YX06 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv21A0A0A6YX06 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv21A0A0A6YX06 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv21A0A0A6YX06 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv21A0A0A6YX06 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.56■□□□□ 0.24
Trbv21A0A0A6YX06 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trbv21A0A0A6YX06 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv21A0A0A6YX06 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.56■□□□□ 0.24
Trbv21A0A0A6YX06 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv21A0A0A6YX06 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv21A0A0A6YX06 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv21A0A0A6YX06 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.56■□□□□ 0.24
Trbv21A0A0A6YX06 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.56■□□□□ 0.24
Trbv21A0A0A6YX06 Gm5408-201ENSMUST00000197998 747 ntBASIC16.56■□□□□ 0.24
Trbv21A0A0A6YX06 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms