Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Gm12527-201ENSMUST00000117967 564 ntBASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Gm2559-201ENSMUST00000201323 363 ntBASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbc1A0A0A6YWV4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trbc1A0A0A6YWV4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbc1A0A0A6YWV4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbc1A0A0A6YWV4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbc1A0A0A6YWV4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.47■□□□□ 0.23
Trbc1A0A0A6YWV4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trbc1A0A0A6YWV4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbc1A0A0A6YWV4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbc1A0A0A6YWV4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbc1A0A0A6YWV4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.46■□□□□ 0.23
Trbc1A0A0A6YWV4 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.46■□□□□ 0.23
Trbc1A0A0A6YWV4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbc1A0A0A6YWV4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbc1A0A0A6YWV4 Gm2399-201ENSMUST00000104944 225 ntBASIC16.46■□□□□ 0.23
Trbc1A0A0A6YWV4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.46■□□□□ 0.23
Trbc1A0A0A6YWV4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbc1A0A0A6YWV4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbc1A0A0A6YWV4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.46■□□□□ 0.23
Trbc1A0A0A6YWV4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trbc1A0A0A6YWV4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbc1A0A0A6YWV4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbc1A0A0A6YWV4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbc1A0A0A6YWV4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbc1A0A0A6YWV4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbc1A0A0A6YWV4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trbc1A0A0A6YWV4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trbc1A0A0A6YWV4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trbc1A0A0A6YWV4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Gm12896-201ENSMUST00000118430 226 ntBASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Gm27011-201ENSMUST00000182352 972 ntBASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trbc1A0A0A6YWV4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trbc1A0A0A6YWV4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbc1A0A0A6YWV4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbc1A0A0A6YWV4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbc1A0A0A6YWV4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbc1A0A0A6YWV4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbc1A0A0A6YWV4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Trbc1A0A0A6YWV4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.44■□□□□ 0.22
Trbc1A0A0A6YWV4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbc1A0A0A6YWV4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbc1A0A0A6YWV4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.44■□□□□ 0.22
Trbc1A0A0A6YWV4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.44■□□□□ 0.22
Trbc1A0A0A6YWV4 Gm20760-201ENSMUST00000179197 648 ntBASIC16.44■□□□□ 0.22
Trbc1A0A0A6YWV4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.44■□□□□ 0.22
Trbc1A0A0A6YWV4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbc1A0A0A6YWV4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbc1A0A0A6YWV4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbc1A0A0A6YWV4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbc1A0A0A6YWV4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.43■□□□□ 0.22
Trbc1A0A0A6YWV4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbc1A0A0A6YWV4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.43■□□□□ 0.22
Trbc1A0A0A6YWV4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbc1A0A0A6YWV4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbc1A0A0A6YWV4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trbc1A0A0A6YWV4 Gm10653-202ENSMUST00000139570 835 ntBASIC16.43■□□□□ 0.22
Trbc1A0A0A6YWV4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbc1A0A0A6YWV4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbc1A0A0A6YWV4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms