Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gm9194-201ENSMUST00000220749 1447 ntBASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gm26833-201ENSMUST00000180899 440 ntBASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms