Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.71□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.68□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Trav15-2-dv6-2A0A075B650 Gm6139-201ENSMUST00000079261 882 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms