Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16nA0A075B634 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16nA0A075B634 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Smad6-203ENSMUST00000179458 273 ntBASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16nA0A075B634 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.58□□□□□ -0.24
Trav16nA0A075B634 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16nA0A075B634 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16nA0A075B634 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16nA0A075B634 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16nA0A075B634 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16nA0A075B634 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16nA0A075B634 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.57□□□□□ -0.24
Trav16nA0A075B634 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav16nA0A075B634 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav16nA0A075B634 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16nA0A075B634 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16nA0A075B634 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16nA0A075B634 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16nA0A075B634 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16nA0A075B634 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Trav16nA0A075B634 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Tgds-204ENSMUST00000228543 1594 ntBASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16nA0A075B634 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16nA0A075B634 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav16nA0A075B634 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16nA0A075B634 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16nA0A075B634 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16nA0A075B634 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16nA0A075B634 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16nA0A075B634 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16nA0A075B634 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav16nA0A075B634 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16nA0A075B634 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms