Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.31■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.3■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Gm6139-201ENSMUST00000079261 882 ntBASIC15.29■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Gm27454-201ENSMUST00000185090 204 ntBASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.27■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.27■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.27■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.26■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.26■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Gm43017-201ENSMUST00000198296 752 ntBASIC15.25■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Gm43060-201ENSMUST00000200621 289 ntBASIC15.25■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav15d-1-dv6d-1A0A075B624 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms