Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav5-1A0A075B5Z7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-1A0A075B5Z7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-1A0A075B5Z7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 Iqck-206ENSMUST00000208658 2891 ntBASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-1A0A075B5Z7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Mir1199-201ENSMUST00000117015 119 ntBASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Gm11643-201ENSMUST00000119578 864 ntBASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Gm12382-201ENSMUST00000122005 922 ntBASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Mir2861-201ENSMUST00000175539 82 ntBASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-1A0A075B5Z7 Golph3-205ENSMUST00000228671 2842 ntBASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav5-1A0A075B5Z7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.39■□□□□ 0.05
Trav5-1A0A075B5Z7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5-1A0A075B5Z7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5-1A0A075B5Z7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav5-1A0A075B5Z7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5-1A0A075B5Z7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5-1A0A075B5Z7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5-1A0A075B5Z7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav5-1A0A075B5Z7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5-1A0A075B5Z7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav5-1A0A075B5Z7 Gm43183-201ENSMUST00000200632 547 ntBASIC15.38■□□□□ 0.05
Trav5-1A0A075B5Z7 Gm42545-201ENSMUST00000202755 922 ntBASIC15.38■□□□□ 0.05
Trav5-1A0A075B5Z7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav5-1A0A075B5Z7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5-1A0A075B5Z7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms