Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Mir1945-201ENSMUST00000157919 78 ntBASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm20453-201ENSMUST00000173968 226 ntBASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm27219-201ENSMUST00000184633 742 ntBASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm44360-201ENSMUST00000200081 82 ntBASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm38574-201ENSMUST00000211855 640 ntBASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 AC132384.3-201ENSMUST00000219709 472 ntBASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm18940-201ENSMUST00000222518 871 ntBASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm8526-201ENSMUST00000079153 475 ntBASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Gm11821-201ENSMUST00000117335 979 ntBASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Gm15331-201ENSMUST00000120225 385 ntBASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Gm25246-201ENSMUST00000175476 69 ntBASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Gm7745-201ENSMUST00000182235 973 ntBASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Gm28064-201ENSMUST00000185639 858 ntBASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Gm7166-201ENSMUST00000199715 303 ntBASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Gm45082-201ENSMUST00000206082 601 ntBASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 AC211878.6-201ENSMUST00000221896 358 ntBASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Gm7808-201ENSMUST00000082002 387 ntBASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Upf3bQ3ULL6 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm11105-201ENSMUST00000112781 478 ntBASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm12099-201ENSMUST00000118660 750 ntBASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm15877-201ENSMUST00000121897 964 ntBASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm15335-201ENSMUST00000122442 411 ntBASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm22867-201ENSMUST00000157499 109 ntBASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm21772-201ENSMUST00000169213 478 ntBASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Gm17126-201ENSMUST00000172276 523 ntBASIC6.22□□□□□ -1.41
Upf3bQ3ULL6 Mir5125-201ENSMUST00000175240 79 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms