Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.2□□□□□ -1.42
Atxn1P54254 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
Atxn1P54254 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Atxn1P54254 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.2□□□□□ -1.42
Atxn1P54254 Gm37569-201ENSMUST00000192111 1722 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Atxn1P54254 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Atxn1P54254 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Atxn1P54254 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.19□□□□□ -1.42
Atxn1P54254 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Atxn1P54254 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Atxn1P54254 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
Atxn1P54254 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Atxn1P54254 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Atxn1P54254 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Atxn1P54254 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Mir678-201ENSMUST00000102114 84 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Atxn1P54254 Gm8501-201ENSMUST00000117684 432 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Gm11972-201ENSMUST00000118514 389 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Gm5809-201ENSMUST00000121854 529 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Gm26023-201ENSMUST00000122722 313 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC6.19□□□□□ -1.42
Atxn1P54254 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.19□□□□□ -1.42
Atxn1P54254 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.19□□□□□ -1.42
Atxn1P54254 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.19□□□□□ -1.42
Atxn1P54254 Gm26037-201ENSMUST00000158150 311 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Gm25487-201ENSMUST00000158725 125 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Gm7335-201ENSMUST00000172475 373 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Gm3307-201ENSMUST00000176164 632 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Atxn1P54254 Gm25019-201ENSMUST00000179732 110 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Atxn1P54254 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC6.19□□□□□ -1.42
Atxn1P54254 Gm37493-201ENSMUST00000193167 433 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Gm18325-201ENSMUST00000203228 835 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Gm10688-201ENSMUST00000214985 520 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Gm36262-201ENSMUST00000223274 499 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 CT030662.3-201ENSMUST00000228751 476 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Atxn1P54254 Gm24525-201ENSMUST00000082917 151 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Mir188-201ENSMUST00000083464 68 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Mir331-201ENSMUST00000083673 96 ntBASIC6.19□□□□□ -1.42
Atxn1P54254 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Atxn1P54254 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Atxn1P54254 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.19□□□□□ -1.42
Atxn1P54254 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Atxn1P54254 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atxn1P54254 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Atxn1P54254 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.19□□□□□ -1.42
Atxn1P54254 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Atxn1P54254 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.18□□□□□ -1.42
Atxn1P54254 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.18□□□□□ -1.42
Atxn1P54254 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Atxn1P54254 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Atxn1P54254 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Atxn1P54254 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.18□□□□□ -1.42
Atxn1P54254 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Atxn1P54254 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Atxn1P54254 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.18□□□□□ -1.42
Atxn1P54254 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Atxn1P54254 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Atxn1P54254 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Atxn1P54254 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Atxn1P54254 Mir708-201ENSMUST00000102189 109 ntBASIC6.18□□□□□ -1.42
Atxn1P54254 Gm13265-201ENSMUST00000118090 421 ntBASIC6.18□□□□□ -1.42
Atxn1P54254 Gm14520-201ENSMUST00000119258 387 ntBASIC6.18□□□□□ -1.42
Atxn1P54254 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.18□□□□□ -1.42
Atxn1P54254 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.18□□□□□ -1.42
Atxn1P54254 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Atxn1P54254 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.18□□□□□ -1.42
Atxn1P54254 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC6.18□□□□□ -1.42
Atxn1P54254 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms