Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col2a1P28481 Gm14871-201ENSMUST00000119056 194 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Gm13259-201ENSMUST00000120792 456 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.6□□□□□ -1.35
Col2a1P28481 Gm26086-201ENSMUST00000157902 263 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Gm22312-201ENSMUST00000158005 130 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Gm17142-201ENSMUST00000164933 645 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col2a1P28481 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col2a1P28481 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.6□□□□□ -1.35
Col2a1P28481 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC6.6□□□□□ -1.35
Col2a1P28481 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col2a1P28481 AC138284.5-201ENSMUST00000214389 652 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC6.6□□□□□ -1.35
Col2a1P28481 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col2a1P28481 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col2a1P28481 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col2a1P28481 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col2a1P28481 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col2a1P28481 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col2a1P28481 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
Col2a1P28481 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
Col2a1P28481 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col2a1P28481 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col2a1P28481 AC154257.1-201ENSMUST00000224811 1525 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col2a1P28481 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col2a1P28481 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col2a1P28481 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col2a1P28481 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.6□□□□□ -1.35
Col2a1P28481 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC6.6□□□□□ -1.35
Col2a1P28481 Mir7006-201ENSMUST00000183624 69 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Gm27193-201ENSMUST00000184217 586 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Gm2325-201ENSMUST00000186637 581 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Gm6137-201ENSMUST00000187552 578 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC6.6□□□□□ -1.35
Col2a1P28481 Gm38670-201ENSMUST00000199248 77 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.6□□□□□ -1.35
Col2a1P28481 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.6□□□□□ -1.35
Col2a1P28481 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col2a1P28481 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col2a1P28481 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
Col2a1P28481 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col2a1P28481 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.59□□□□□ -1.35
Col2a1P28481 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col2a1P28481 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.59□□□□□ -1.35
Col2a1P28481 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.59□□□□□ -1.35
Col2a1P28481 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Col2a1P28481 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col2a1P28481 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col2a1P28481 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Col2a1P28481 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Col2a1P28481 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.59□□□□□ -1.35
Col2a1P28481 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Col2a1P28481 Gm42440-201ENSMUST00000197906 2284 ntBASIC6.59□□□□□ -1.35
Col2a1P28481 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col2a1P28481 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col2a1P28481 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col2a1P28481 Gm11987-201ENSMUST00000118524 381 ntBASIC6.59□□□□□ -1.36
Col2a1P28481 Gm15741-201ENSMUST00000119401 754 ntBASIC6.59□□□□□ -1.36
Col2a1P28481 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.59□□□□□ -1.36
Col2a1P28481 Gm11825-201ENSMUST00000120710 736 ntBASIC6.59□□□□□ -1.36
Col2a1P28481 Gm23872-201ENSMUST00000175432 77 ntBASIC6.59□□□□□ -1.36
Col2a1P28481 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.59□□□□□ -1.36
Col2a1P28481 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC6.59□□□□□ -1.36
Col2a1P28481 Gm27985-201ENSMUST00000185112 378 ntBASIC6.59□□□□□ -1.36
Col2a1P28481 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col2a1P28481 Gm38384-201ENSMUST00000195413 1122 ntBASIC6.59□□□□□ -1.36
Col2a1P28481 Gm4874-201ENSMUST00000203589 691 ntBASIC6.59□□□□□ -1.36
Col2a1P28481 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.59□□□□□ -1.36
Col2a1P28481 AC156950.1-201ENSMUST00000219604 456 ntBASIC6.59□□□□□ -1.36
Col2a1P28481 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.59□□□□□ -1.36
Col2a1P28481 CT030238.4-203ENSMUST00000227343 836 ntBASIC6.59□□□□□ -1.36
Col2a1P28481 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col2a1P28481 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Col2a1P28481 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.58□□□□□ -1.36
Col2a1P28481 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Col2a1P28481 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col2a1P28481 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col2a1P28481 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col2a1P28481 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col2a1P28481 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col2a1P28481 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col2a1P28481 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.58□□□□□ -1.36
Col2a1P28481 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.58□□□□□ -1.36
Col2a1P28481 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col2a1P28481 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col2a1P28481 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col2a1P28481 Gm22499-201ENSMUST00000104501 135 ntBASIC6.58□□□□□ -1.36
Col2a1P28481 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col2a1P28481 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.58□□□□□ -1.36
Col2a1P28481 Gm13537-201ENSMUST00000120467 267 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 122.2 ms