Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm8581-201ENSMUST00000188636 890 ntBASIC4.9□□□□□ -1.63
Cdx1P18111 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cdx1P18111 Gm18849-201ENSMUST00000189861 560 ntBASIC4.9□□□□□ -1.63
Cdx1P18111 Gm6074-201ENSMUST00000193340 451 ntBASIC4.9□□□□□ -1.63
Cdx1P18111 Gm37177-201ENSMUST00000193768 417 ntBASIC4.9□□□□□ -1.63
Cdx1P18111 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC4.9□□□□□ -1.63
Cdx1P18111 Gm42428-201ENSMUST00000198677 302 ntBASIC4.9□□□□□ -1.63
Cdx1P18111 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC4.9□□□□□ -1.63
Cdx1P18111 Gm17918-201ENSMUST00000205315 574 ntBASIC4.9□□□□□ -1.63
Cdx1P18111 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.9□□□□□ -1.63
Cdx1P18111 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC4.9□□□□□ -1.63
Cdx1P18111 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC4.9□□□□□ -1.63
Cdx1P18111 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cdx1P18111 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC4.9□□□□□ -1.63
Cdx1P18111 AC091783.2-201ENSMUST00000224626 740 ntBASIC4.9□□□□□ -1.63
Cdx1P18111 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Cdx1P18111 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Cdx1P18111 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Cdx1P18111 n-R5s56-201ENSMUST00000082521 105 ntBASIC4.9□□□□□ -1.63
Cdx1P18111 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC4.9□□□□□ -1.63
Cdx1P18111 Gm38284-201ENSMUST00000194803 4539 ntBASIC4.9□□□□□ -1.63
Cdx1P18111 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.9□□□□□ -1.63
Cdx1P18111 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
Cdx1P18111 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cdx1P18111 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Cdx1P18111 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cdx1P18111 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.9□□□□□ -1.63
Cdx1P18111 Gm19024-201ENSMUST00000194681 1319 ntBASIC4.9□□□□□ -1.63
Cdx1P18111 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Cdx1P18111 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cdx1P18111 Gm38277-201ENSMUST00000195172 1367 ntBASIC4.9□□□□□ -1.63
Cdx1P18111 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm44739-201ENSMUST00000205294 1426 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm26984-201ENSMUST00000182345 3510 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.89□□□□□ -1.63
Cdx1P18111 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm19113-201ENSMUST00000217552 1828 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm24790-201ENSMUST00000104285 132 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm22953-201ENSMUST00000116724 101 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm12115-201ENSMUST00000119969 447 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm13462-201ENSMUST00000121472 961 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Sms-ps-201ENSMUST00000121773 1101 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC4.89□□□□□ -1.63
Cdx1P18111 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm25057-201ENSMUST00000157366 88 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm24359-201ENSMUST00000158418 221 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm22094-201ENSMUST00000158976 117 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm28871-201ENSMUST00000186191 687 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm37716-201ENSMUST00000193553 947 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm35013-201ENSMUST00000197218 832 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm19088-201ENSMUST00000198800 566 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm8190-201ENSMUST00000199603 586 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm43762-201ENSMUST00000201521 295 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm43748-201ENSMUST00000202329 1233 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm7832-201ENSMUST00000202613 880 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm18537-201ENSMUST00000205709 989 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC4.89□□□□□ -1.63
Cdx1P18111 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm2774-201ENSMUST00000213650 1165 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 AC157085.1-201ENSMUST00000216343 162 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 AC124356.2-201ENSMUST00000221874 336 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 AC073562.1-201ENSMUST00000222117 401 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Gm9788-201ENSMUST00000057038 906 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cdx1P18111 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm6990-201ENSMUST00000086830 348 ntBASIC4.89□□□□□ -1.63
Cdx1P18111 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cdx1P18111 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cdx1P18111 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx1P18111 Gm28240-201ENSMUST00000187560 2053 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm44518-201ENSMUST00000208080 4370 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.88□□□□□ -1.63
Cdx1P18111 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx1P18111 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
Cdx1P18111 Gm43490-201ENSMUST00000197593 2652 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms