Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28851-202ENSMUST00000189757 484 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28461-201ENSMUST00000190023 484 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm42646-201ENSMUST00000202233 914 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm44225-201ENSMUST00000203582 186 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm44048-201ENSMUST00000204531 361 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col1a1P11087 Gm20368-201ENSMUST00000220716 301 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Col1a1P11087 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC6.85□□□□□ -1.31
Col1a1P11087 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Col1a1P11087 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Col1a1P11087 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col1a1P11087 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.85□□□□□ -1.31
Col1a1P11087 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.84□□□□□ -1.31
Col1a1P11087 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col1a1P11087 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col1a1P11087 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col1a1P11087 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
Col1a1P11087 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Col1a1P11087 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col1a1P11087 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col1a1P11087 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col1a1P11087 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
Col1a1P11087 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.84□□□□□ -1.31
Col1a1P11087 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col1a1P11087 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col1a1P11087 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
Col1a1P11087 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col1a1P11087 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.84□□□□□ -1.31
Col1a1P11087 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.84□□□□□ -1.31
Col1a1P11087 Gm12732-201ENSMUST00000121688 180 ntBASIC6.84□□□□□ -1.31
Col1a1P11087 Gm8032-201ENSMUST00000171009 574 ntBASIC6.84□□□□□ -1.31
Col1a1P11087 Mrgpra14-201ENSMUST00000189782 913 ntBASIC6.84□□□□□ -1.31
Col1a1P11087 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.84□□□□□ -1.31
Col1a1P11087 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.84□□□□□ -1.31
Col1a1P11087 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.84□□□□□ -1.31
Col1a1P11087 Gm2053-201ENSMUST00000195671 631 ntBASIC6.84□□□□□ -1.31
Col1a1P11087 Gm20786-201ENSMUST00000212649 436 ntBASIC6.84□□□□□ -1.31
Col1a1P11087 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col1a1P11087 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.84□□□□□ -1.31
Col1a1P11087 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col1a1P11087 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Col1a1P11087 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col1a1P11087 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Col1a1P11087 Gm22807-201ENSMUST00000082737 129 ntBASIC6.84□□□□□ -1.31
Col1a1P11087 Gm23795-201ENSMUST00000084006 137 ntBASIC6.84□□□□□ -1.31
Col1a1P11087 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col1a1P11087 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col1a1P11087 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col1a1P11087 Gm45172-201ENSMUST00000206054 1301 ntBASIC6.84□□□□□ -1.31
Col1a1P11087 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.84□□□□□ -1.31
Col1a1P11087 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.84□□□□□ -1.32
Col1a1P11087 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Col1a1P11087 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.84□□□□□ -1.32
Col1a1P11087 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Col1a1P11087 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Col1a1P11087 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Col1a1P11087 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
Col1a1P11087 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col1a1P11087 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col1a1P11087 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Col1a1P11087 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col1a1P11087 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Col1a1P11087 AC135669.2-201ENSMUST00000215636 4958 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col1a1P11087 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.83□□□□□ -1.32
Col1a1P11087 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.83□□□□□ -1.32
Col1a1P11087 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col1a1P11087 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.83□□□□□ -1.32
Col1a1P11087 Gm17791-201ENSMUST00000185660 1501 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col1a1P11087 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Col1a1P11087 Gm15490-201ENSMUST00000119894 387 ntBASIC6.83□□□□□ -1.32
Col1a1P11087 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms