Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm3835-201ENSMUST00000120752 403 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm12639-201ENSMUST00000121400 493 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm12094-201ENSMUST00000121781 472 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm23392-201ENSMUST00000157580 113 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm26182-201ENSMUST00000157688 116 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm26486-201ENSMUST00000158021 110 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm17085-201ENSMUST00000165425 502 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm19815-201ENSMUST00000175818 335 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm26528-201ENSMUST00000181965 283 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm28006-201ENSMUST00000183841 122 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm29641-201ENSMUST00000188955 259 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm38068-201ENSMUST00000192546 540 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm34149-201ENSMUST00000203547 304 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm45196-201ENSMUST00000206751 825 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm19032-201ENSMUST00000208584 592 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm45319-201ENSMUST00000210220 318 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 AC151843.1-201ENSMUST00000215960 691 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 AC116726.2-201ENSMUST00000217629 986 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 AC165287.1-201ENSMUST00000224985 178 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 AC161252.1-201ENSMUST00000225536 467 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.03□□□□□ -1.44
Pcdh1F7BJK1 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.02□□□□□ -1.44
Pcdh1F7BJK1 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm11926-201ENSMUST00000118520 430 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm13024-201ENSMUST00000121756 718 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm14613-201ENSMUST00000122239 752 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm10157-201ENSMUST00000139408 343 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm11107-201ENSMUST00000165414 505 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm18428-201ENSMUST00000194986 791 ntBASIC6.02□□□□□ -1.45
Pcdh1F7BJK1 Gm19739-201ENSMUST00000195941 153 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms