Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm29196-201ENSMUST00000189239 618 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm29551-201ENSMUST00000190913 698 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm18891-201ENSMUST00000216734 1087 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 AC161609.1-201ENSMUST00000225878 474 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm28667-201ENSMUST00000189873 2171 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 AC141476.1-201ENSMUST00000224988 3387 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm12285-201ENSMUST00000117347 233 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm6175-201ENSMUST00000121351 400 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm25430-201ENSMUST00000157614 289 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm26379-202ENSMUST00000200225 132 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm6011-201ENSMUST00000211736 1796 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm46998-201ENSMUST00000221444 330 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 AC154527.1-201ENSMUST00000225809 242 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Pdgfra-201ENSMUST00000000476 6549 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm37864-201ENSMUST00000195308 3075 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Hdac4-202ENSMUST00000097644 8100 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm23069-201ENSMUST00000158240 311 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Mir713-201ENSMUST00000178651 108 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm43580-201ENSMUST00000202892 284 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm5080-201ENSMUST00000220341 743 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 CT030254.1-201ENSMUST00000225450 1078 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 AC156163.1-201ENSMUST00000215598 3369 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm12854-201ENSMUST00000128518 297 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm28066-201ENSMUST00000188657 472 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm4501-201ENSMUST00000207330 551 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm4558-201ENSMUST00000207886 521 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm7665-201ENSMUST00000076710 297 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm38198-201ENSMUST00000191772 3581 ntBASIC3.2□□□□□ -1.9
Herc1E9PZP8 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Herc1E9PZP8 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Aagab-201ENSMUST00000041551 5294 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Herc1E9PZP8 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms