Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm15164-201ENSMUST00000122203 271 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Mir1960-201ENSMUST00000157488 78 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm24081-201ENSMUST00000175177 125 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm28871-201ENSMUST00000186191 687 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm28973-201ENSMUST00000189310 613 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm18290-201ENSMUST00000202900 844 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm44163-201ENSMUST00000205140 475 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm18193-201ENSMUST00000210017 772 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm5229-201ENSMUST00000039375 354 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cstf3Q99LI7 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.82□□□□□ -1.48
Cstf3Q99LI7 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm26143-201ENSMUST00000104480 108 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm13176-201ENSMUST00000117910 477 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm14788-201ENSMUST00000119457 375 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm23467-201ENSMUST00000157127 159 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm22600-201ENSMUST00000157598 269 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Mir1953-201ENSMUST00000157866 89 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm8582-201ENSMUST00000164061 789 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm20480-201ENSMUST00000173953 250 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm5430-201ENSMUST00000182525 915 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm38177-201ENSMUST00000192213 1040 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm38237-201ENSMUST00000193366 376 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm38384-201ENSMUST00000195413 1122 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm37358-201ENSMUST00000195492 479 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 AC134254.4-201ENSMUST00000223086 370 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf3Q99LI7 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms