Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Trim9Q8C7M3 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Trim9Q8C7M3 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Trim9Q8C7M3 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.59□□□□□ -1.36
Trim9Q8C7M3 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Trim9Q8C7M3 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm15618-201ENSMUST00000121610 452 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm25013-201ENSMUST00000158402 128 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm24179-201ENSMUST00000158925 127 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm22923-201ENSMUST00000174952 110 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm27512-201ENSMUST00000175328 126 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm4845-201ENSMUST00000179202 562 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm17048-201ENSMUST00000179266 847 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm21399-201ENSMUST00000180210 597 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm26923-201ENSMUST00000182615 996 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm28066-201ENSMUST00000188657 472 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Ighv6-2-201ENSMUST00000192430 295 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm18427-201ENSMUST00000195422 515 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm44219-201ENSMUST00000203005 273 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm44108-201ENSMUST00000203525 422 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm3213-201ENSMUST00000219296 441 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 AC159297.2-201ENSMUST00000219567 1075 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim9Q8C7M3 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm37262-201ENSMUST00000192816 1818 ntBASIC6.57□□□□□ -1.36
Trim9Q8C7M3 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm15394-201ENSMUST00000119656 1308 ntBASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm7171-201ENSMUST00000177413 1349 ntBASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm11617-201ENSMUST00000119609 639 ntBASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm8317-201ENSMUST00000121261 471 ntBASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm15237-201ENSMUST00000122104 469 ntBASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm3242-201ENSMUST00000171273 485 ntBASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm20620-201ENSMUST00000177528 168 ntBASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm29663-201ENSMUST00000186962 853 ntBASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm28766-201ENSMUST00000191086 234 ntBASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm37463-201ENSMUST00000193819 796 ntBASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm43779-201ENSMUST00000196691 829 ntBASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm44494-201ENSMUST00000196760 129 ntBASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.57□□□□□ -1.36
Trim9Q8C7M3 Gm43743-202ENSMUST00000198353 491 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms