Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm20773-201ENSMUST00000178940 681 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm29284-201ENSMUST00000188363 255 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm29460-201ENSMUST00000188607 714 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm21040-201ENSMUST00000199493 1132 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 AC127279.1-201ENSMUST00000220140 637 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 AC115304.1-202ENSMUST00000226850 837 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 AC107369.1-201ENSMUST00000227373 860 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC7.9□□□□□ -1.14
Trim47Q8C0E3 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim47Q8C0E3 Gm44996-201ENSMUST00000208787 2980 ntBASIC7.9□□□□□ -1.15
Trim47Q8C0E3 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Trim47Q8C0E3 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Trim47Q8C0E3 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.9□□□□□ -1.15
Trim47Q8C0E3 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim47Q8C0E3 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Trim47Q8C0E3 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Trim47Q8C0E3 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.9□□□□□ -1.15
Trim47Q8C0E3 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim47Q8C0E3 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim47Q8C0E3 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.9□□□□□ -1.15
Trim47Q8C0E3 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm19093-201ENSMUST00000210671 1454 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm25379-201ENSMUST00000104338 114 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm25498-201ENSMUST00000104424 129 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm11372-201ENSMUST00000117348 570 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm12641-201ENSMUST00000117874 985 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm23885-201ENSMUST00000122682 294 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm24286-201ENSMUST00000157632 128 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm22728-201ENSMUST00000158087 129 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm25434-201ENSMUST00000158278 167 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm26025-201ENSMUST00000158655 271 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm27014-201ENSMUST00000182658 937 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm6931-201ENSMUST00000183103 371 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Mir8120-201ENSMUST00000185035 139 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm9127-201ENSMUST00000188041 985 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm28474-201ENSMUST00000188501 315 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm28788-201ENSMUST00000189717 375 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm29558-201ENSMUST00000190134 375 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm30517-201ENSMUST00000197350 772 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm18215-201ENSMUST00000204429 798 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm18672-201ENSMUST00000208035 270 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm7751-201ENSMUST00000212868 709 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm9535-201ENSMUST00000218499 768 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm46193-201ENSMUST00000219399 364 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm30738-201ENSMUST00000221346 502 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 AC124356.2-201ENSMUST00000221874 336 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 CT030238.3-201ENSMUST00000227352 875 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 AC115735.5-201ENSMUST00000228386 397 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm24921-201ENSMUST00000083024 107 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 n-R5s169-201ENSMUST00000083110 120 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm37745-201ENSMUST00000193304 8163 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm37790-201ENSMUST00000193136 3346 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 AC129308.1-201ENSMUST00000223800 2309 ntBASIC7.89□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms