Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.49□□□□□ -1.37
Scaf4Q6PFF0 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Scaf4Q6PFF0 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
Scaf4Q6PFF0 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm17101-201ENSMUST00000169520 1588 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 AC154681.1-201ENSMUST00000225876 1735 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Mir546-201ENSMUST00000102105 121 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Snord65-201ENSMUST00000104269 72 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm14513-201ENSMUST00000117403 123 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm13359-201ENSMUST00000119000 695 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm11689-201ENSMUST00000120766 302 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm11263-201ENSMUST00000121853 749 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm15242-201ENSMUST00000122459 283 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm22235-201ENSMUST00000157085 110 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm25839-201ENSMUST00000158921 103 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm24923-201ENSMUST00000178201 88 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm20832-201ENSMUST00000189076 665 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm5575-201ENSMUST00000190879 398 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm30638-201ENSMUST00000195570 656 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm36728-201ENSMUST00000195782 665 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm8454-201ENSMUST00000196980 811 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm42625-201ENSMUST00000198611 922 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm5338-201ENSMUST00000209530 639 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 AC138284.2-201ENSMUST00000213982 567 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm6477-201ENSMUST00000217098 764 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm6906-201ENSMUST00000218014 569 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 AC121844.1-201ENSMUST00000218706 137 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 AC130823.2-201ENSMUST00000226169 290 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Scaf4Q6PFF0 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Gm25379-201ENSMUST00000104338 114 ntBASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Gm15110-201ENSMUST00000117545 881 ntBASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Gm13454-201ENSMUST00000118166 483 ntBASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Gm15621-201ENSMUST00000119162 364 ntBASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Gm14360-201ENSMUST00000120670 393 ntBASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Gm5135-201ENSMUST00000121100 573 ntBASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Gm22820-201ENSMUST00000157205 329 ntBASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Gm23079-201ENSMUST00000157847 117 ntBASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Gm24176-201ENSMUST00000158928 121 ntBASIC6.47□□□□□ -1.37
Scaf4Q6PFF0 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 122.5 ms