Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm26557-201ENSMUST00000180756 493 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm27998-201ENSMUST00000184902 361 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm44539-201ENSMUST00000206010 238 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm19186-201ENSMUST00000219922 333 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 AC154646.1-201ENSMUST00000225011 1092 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm24200-201ENSMUST00000082955 157 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim43aQ3TL54 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.21□□□□□ -1.41
Trim43aQ3TL54 AC162908.1-201ENSMUST00000219164 4563 ntBASIC6.21□□□□□ -1.41
Trim43aQ3TL54 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Trim43aQ3TL54 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.21□□□□□ -1.41
Trim43aQ3TL54 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Trim43aQ3TL54 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Trim43aQ3TL54 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Trim43aQ3TL54 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.21□□□□□ -1.41
Trim43aQ3TL54 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Gm25346-201ENSMUST00000104509 128 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Gm14580-201ENSMUST00000119122 718 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Gm12189-201ENSMUST00000119779 912 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Gm26162-201ENSMUST00000157793 132 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Gm23162-201ENSMUST00000175081 121 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Mir7082-201ENSMUST00000183526 92 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Gm29124-201ENSMUST00000186576 452 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Gm2367-201ENSMUST00000192374 472 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Gm37716-201ENSMUST00000193553 947 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Gm37809-201ENSMUST00000195050 931 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Gm44538-201ENSMUST00000205615 348 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 AC130827.1-201ENSMUST00000220476 3850 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Slco6b1-202ENSMUST00000178359 1778 ntBASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim43aQ3TL54 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim43aQ3TL54 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.2□□□□□ -1.42
Trim43aQ3TL54 AC155710.1-201ENSMUST00000219913 1353 ntBASIC6.2□□□□□ -1.42
Trim43aQ3TL54 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim43aQ3TL54 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim43aQ3TL54 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim43aQ3TL54 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim43aQ3TL54 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.2□□□□□ -1.42
Trim43aQ3TL54 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim43aQ3TL54 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim43aQ3TL54 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim43aQ3TL54 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim43aQ3TL54 Gm14659-201ENSMUST00000117667 843 ntBASIC6.2□□□□□ -1.42
Trim43aQ3TL54 Gm12985-201ENSMUST00000118376 183 ntBASIC6.2□□□□□ -1.42
Trim43aQ3TL54 Zfp389-201ENSMUST00000118425 675 ntBASIC6.2□□□□□ -1.42
Trim43aQ3TL54 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim43aQ3TL54 Gm12262-201ENSMUST00000119915 305 ntBASIC6.2□□□□□ -1.42
Trim43aQ3TL54 Gm14732-201ENSMUST00000121372 545 ntBASIC6.2□□□□□ -1.42
Trim43aQ3TL54 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.2□□□□□ -1.42
Trim43aQ3TL54 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.2□□□□□ -1.42
Trim43aQ3TL54 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms