Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC5.46□□□□□ -1.54
Scn1bP97952 Gm5284-201ENSMUST00000199053 903 ntBASIC5.46□□□□□ -1.54
Scn1bP97952 Gm3549-201ENSMUST00000203873 794 ntBASIC5.46□□□□□ -1.54
Scn1bP97952 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Scn1bP97952 Gm9367-201ENSMUST00000205703 546 ntBASIC5.46□□□□□ -1.54
Scn1bP97952 Gm44896-201ENSMUST00000206190 772 ntBASIC5.46□□□□□ -1.54
Scn1bP97952 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.46□□□□□ -1.54
Scn1bP97952 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Scn1bP97952 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.46□□□□□ -1.54
Scn1bP97952 Gm18226-201ENSMUST00000215261 521 ntBASIC5.46□□□□□ -1.54
Scn1bP97952 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Scn1bP97952 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Scn1bP97952 Gm18586-201ENSMUST00000217265 518 ntBASIC5.46□□□□□ -1.54
Scn1bP97952 Gm31711-201ENSMUST00000220687 196 ntBASIC5.46□□□□□ -1.54
Scn1bP97952 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.46□□□□□ -1.54
Scn1bP97952 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Scn1bP97952 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
Scn1bP97952 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Scn1bP97952 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Scn1bP97952 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Scn1bP97952 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Scn1bP97952 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Scn1bP97952 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.46□□□□□ -1.54
Scn1bP97952 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Scn1bP97952 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Scn1bP97952 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Scn1bP97952 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Scn1bP97952 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Scn1bP97952 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Scn1bP97952 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.45□□□□□ -1.54
Scn1bP97952 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
Scn1bP97952 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Scn1bP97952 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Mir674-201ENSMUST00000102421 100 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Gm13141-201ENSMUST00000117417 456 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Gm14885-201ENSMUST00000117969 496 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Gm4886-201ENSMUST00000121874 1176 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Gm23756-201ENSMUST00000157582 114 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.45□□□□□ -1.54
Scn1bP97952 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
Scn1bP97952 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Gm27636-201ENSMUST00000184528 122 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Gm27299-201ENSMUST00000184593 103 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Gm3605-201ENSMUST00000185858 440 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC5.45□□□□□ -1.54
Scn1bP97952 Gm37463-201ENSMUST00000193819 796 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.45□□□□□ -1.54
Scn1bP97952 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC5.45□□□□□ -1.54
Scn1bP97952 Gm29815-201ENSMUST00000202418 178 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Gm6681-201ENSMUST00000205215 607 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Scn1bP97952 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Scn1bP97952 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC5.45□□□□□ -1.54
Scn1bP97952 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Scn1bP97952 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Scn1bP97952 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Scn1bP97952 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Scn1bP97952 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Scn1bP97952 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Scn1bP97952 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.45□□□□□ -1.54
Scn1bP97952 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Scn1bP97952 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Scn1bP97952 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Scn1bP97952 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Scn1bP97952 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.44□□□□□ -1.54
Scn1bP97952 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.44□□□□□ -1.54
Scn1bP97952 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.44□□□□□ -1.54
Scn1bP97952 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
Scn1bP97952 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms