Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Chd1P40201 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
Chd1P40201 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Chd1P40201 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Chd1P40201 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Chd1P40201 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Chd1P40201 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC8.74□□□□□ -1.01
Chd1P40201 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC8.74□□□□□ -1.01
Chd1P40201 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC8.74□□□□□ -1.01
Chd1P40201 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Chd1P40201 Gm37710-201ENSMUST00000193501 1274 ntBASIC8.74□□□□□ -1.01
Chd1P40201 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Chd1P40201 AC152394.2-202ENSMUST00000228503 1064 ntBASIC8.74□□□□□ -1.01
Chd1P40201 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
Chd1P40201 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC8.74□□□□□ -1.01
Chd1P40201 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Chd1P40201 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Chd1P40201 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Chd1P40201 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Chd1P40201 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Chd1P40201 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Chd1P40201 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Chd1P40201 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC8.73□□□□□ -1.01
Chd1P40201 Eif2ak4-206ENSMUST00000110874 5298 ntTSL 5 BASIC8.73□□□□□ -1.01
Chd1P40201 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Chd1P40201 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Chd1P40201 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC8.73□□□□□ -1.01
Chd1P40201 Mir678-201ENSMUST00000102114 84 ntBASIC8.73□□□□□ -1.01
Chd1P40201 Gm11245-201ENSMUST00000119419 1037 ntBASIC8.73□□□□□ -1.01
Chd1P40201 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Chd1P40201 Gm24217-201ENSMUST00000158260 133 ntBASIC8.73□□□□□ -1.01
Chd1P40201 Mir3104-201ENSMUST00000174911 63 ntBASIC8.73□□□□□ -1.01
Chd1P40201 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC8.73□□□□□ -1.01
Chd1P40201 Gm10988-201ENSMUST00000209150 1088 ntBASIC8.73□□□□□ -1.01
Chd1P40201 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Chd1P40201 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Chd1P40201 AC153152.1-201ENSMUST00000221105 2742 ntBASIC8.73□□□□□ -1.01
Chd1P40201 Gm232-201ENSMUST00000216549 2559 ntBASIC8.73□□□□□ -1.01
Chd1P40201 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Chd1P40201 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Chd1P40201 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Chd1P40201 Gm36981-201ENSMUST00000192340 4485 ntBASIC8.73□□□□□ -1.01
Chd1P40201 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Chd1P40201 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC8.73□□□□□ -1.01
Chd1P40201 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Chd1P40201 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Chd1P40201 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Chd1P40201 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Chd1P40201 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC8.72□□□□□ -1.01
Chd1P40201 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Chd1P40201 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Chd1P40201 Gm15186-201ENSMUST00000119345 563 ntBASIC8.72□□□□□ -1.01
Chd1P40201 Gm13213-201ENSMUST00000119668 474 ntBASIC8.72□□□□□ -1.01
Chd1P40201 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Chd1P40201 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Chd1P40201 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC8.72□□□□□ -1.01
Chd1P40201 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC8.72□□□□□ -1.01
Chd1P40201 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Chd1P40201 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Chd1P40201 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Chd1P40201 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Chd1P40201 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Chd1P40201 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Chd1P40201 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Chd1P40201 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
Chd1P40201 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Chd1P40201 AC153940.1-201ENSMUST00000220149 5300 ntBASIC8.72□□□□□ -1.01
Chd1P40201 Gm29293-201ENSMUST00000189416 2188 ntBASIC8.72□□□□□ -1.01
Chd1P40201 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Chd1P40201 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Chd1P40201 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
Chd1P40201 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Chd1P40201 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC8.72□□□□□ -1.01
Chd1P40201 Gm38381-201ENSMUST00000193594 2275 ntBASIC8.72□□□□□ -1.01
Chd1P40201 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Chd1P40201 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Chd1P40201 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Chd1P40201 Gm15803-201ENSMUST00000120118 394 ntBASIC8.71□□□□□ -1.01
Chd1P40201 Gm14620-201ENSMUST00000120656 383 ntBASIC8.71□□□□□ -1.01
Chd1P40201 Gm24628-201ENSMUST00000122761 289 ntBASIC8.71□□□□□ -1.01
Chd1P40201 Gm25865-201ENSMUST00000158247 104 ntBASIC8.71□□□□□ -1.01
Chd1P40201 Gm22650-201ENSMUST00000175138 105 ntBASIC8.71□□□□□ -1.01
Chd1P40201 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC8.71□□□□□ -1.01
Chd1P40201 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Chd1P40201 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Chd1P40201 Snord15b-201ENSMUST00000083032 145 ntBASIC8.71□□□□□ -1.01
Chd1P40201 Gm23972-201ENSMUST00000083322 165 ntBASIC8.71□□□□□ -1.01
Chd1P40201 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Chd1P40201 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Chd1P40201 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC8.71□□□□□ -1.01
Chd1P40201 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC8.71□□□□□ -1.01
Chd1P40201 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Chd1P40201 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Chd1P40201 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Chd1P40201 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Chd1P40201 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Chd1P40201 Ankrd55-205ENSMUST00000223871 3209 ntBASIC8.71□□□□□ -1.01
Chd1P40201 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Chd1P40201 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Chd1P40201 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC8.71□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms