Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Col18a1P39061 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC7.99□□□□□ -1.13
Col18a1P39061 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Col18a1P39061 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
Col18a1P39061 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.99□□□□□ -1.13
Col18a1P39061 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC7.99□□□□□ -1.13
Col18a1P39061 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Col18a1P39061 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Gm37084-201ENSMUST00000191688 5898 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Gm26376-201ENSMUST00000104784 110 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Gm12748-201ENSMUST00000120763 504 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Gm12444-201ENSMUST00000121512 877 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Gm11507-201ENSMUST00000156462 412 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Gm9006-201ENSMUST00000165520 841 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Gm9457-201ENSMUST00000180176 372 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Mir7087-201ENSMUST00000184840 70 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Gm20915-201ENSMUST00000191575 663 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Col18a1P39061 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Col18a1P39061 Gm43136-201ENSMUST00000200403 636 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
Col18a1P39061 Gm36371-201ENSMUST00000209043 1103 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 AC161383.1-201ENSMUST00000227356 527 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Gm23514-201ENSMUST00000082827 130 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Col18a1P39061 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Col18a1P39061 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC7.98□□□□□ -1.13
Col18a1P39061 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col18a1P39061 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col18a1P39061 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Col18a1P39061 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col18a1P39061 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col18a1P39061 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC7.98□□□□□ -1.13
Col18a1P39061 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col18a1P39061 Gm16128-201ENSMUST00000117855 626 ntBASIC7.98□□□□□ -1.13
Col18a1P39061 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC7.98□□□□□ -1.13
Col18a1P39061 Gm11759-201ENSMUST00000121742 464 ntBASIC7.98□□□□□ -1.13
Col18a1P39061 Gm14713-201ENSMUST00000122362 686 ntBASIC7.98□□□□□ -1.13
Col18a1P39061 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC7.98□□□□□ -1.13
Col18a1P39061 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Col18a1P39061 Gm20480-201ENSMUST00000173953 250 ntBASIC7.98□□□□□ -1.13
Col18a1P39061 Gm22698-201ENSMUST00000175375 108 ntBASIC7.98□□□□□ -1.13
Col18a1P39061 Gm26595-201ENSMUST00000181585 484 ntBASIC7.98□□□□□ -1.13
Col18a1P39061 Gm2429-201ENSMUST00000194635 586 ntBASIC7.98□□□□□ -1.13
Col18a1P39061 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC7.98□□□□□ -1.13
Col18a1P39061 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col18a1P39061 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC7.98□□□□□ -1.13
Col18a1P39061 Gm18645-202ENSMUST00000212222 760 ntBASIC7.98□□□□□ -1.13
Col18a1P39061 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC7.98□□□□□ -1.13
Col18a1P39061 AC134254.4-201ENSMUST00000223086 370 ntBASIC7.98□□□□□ -1.13
Col18a1P39061 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC7.98□□□□□ -1.13
Col18a1P39061 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Col18a1P39061 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Col18a1P39061 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col18a1P39061 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col18a1P39061 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col18a1P39061 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col18a1P39061 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col18a1P39061 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC7.98□□□□□ -1.13
Col18a1P39061 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.98□□□□□ -1.13
Col18a1P39061 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC7.98□□□□□ -1.13
Col18a1P39061 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Col18a1P39061 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col18a1P39061 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col18a1P39061 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC7.98□□□□□ -1.13
Col18a1P39061 Gm37233-201ENSMUST00000192173 6263 ntBASIC7.98□□□□□ -1.13
Col18a1P39061 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col18a1P39061 Tecpr2-201ENSMUST00000165978 7778 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col18a1P39061 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Col18a1P39061 Gm42508-201ENSMUST00000199972 3292 ntBASIC7.98□□□□□ -1.13
Col18a1P39061 Gm8980-201ENSMUST00000140232 2197 ntBASIC7.98□□□□□ -1.13
Col18a1P39061 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col18a1P39061 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
Col18a1P39061 Gm26984-201ENSMUST00000182345 3510 ntBASIC7.97□□□□□ -1.13
Col18a1P39061 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col18a1P39061 n-R5s82-201ENSMUST00000104213 109 ntBASIC7.97□□□□□ -1.13
Col18a1P39061 Gm22710-201ENSMUST00000116892 125 ntBASIC7.97□□□□□ -1.13
Col18a1P39061 Gm12115-201ENSMUST00000119969 447 ntBASIC7.97□□□□□ -1.13
Col18a1P39061 Gm7609-204ENSMUST00000161424 461 ntBASIC7.97□□□□□ -1.13
Col18a1P39061 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC7.97□□□□□ -1.13
Col18a1P39061 Gm17847-201ENSMUST00000188261 1127 ntBASIC7.97□□□□□ -1.13
Col18a1P39061 Gm37727-201ENSMUST00000191637 819 ntBASIC7.97□□□□□ -1.13
Col18a1P39061 Gm38224-201ENSMUST00000191648 2100 ntBASIC7.97□□□□□ -1.13
Col18a1P39061 Gm18547-201ENSMUST00000192439 811 ntBASIC7.97□□□□□ -1.13
Col18a1P39061 AC129085.4-201ENSMUST00000224536 570 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms