Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TcraP01849 Gm42685-201ENSMUST00000200378 2390 ntBASIC4.25□□□□□ -1.73
TcraP01849 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TcraP01849 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
TcraP01849 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TcraP01849 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TcraP01849 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
TcraP01849 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TcraP01849 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TcraP01849 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC4.24□□□□□ -1.73
TcraP01849 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TcraP01849 Gm25093-201ENSMUST00000103993 132 ntBASIC4.24□□□□□ -1.73
TcraP01849 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TcraP01849 Gm22103-201ENSMUST00000116733 121 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm26475-201ENSMUST00000116769 121 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm23620-201ENSMUST00000116812 121 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm25042-201ENSMUST00000116856 121 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm25540-201ENSMUST00000116880 121 ntBASIC4.24□□□□□ -1.73
TcraP01849 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC4.24□□□□□ -1.73
TcraP01849 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm11920-201ENSMUST00000118491 563 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm12565-201ENSMUST00000119004 649 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm12175-201ENSMUST00000122081 345 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm23426-201ENSMUST00000122483 318 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm23884-201ENSMUST00000122687 294 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm23888-201ENSMUST00000122690 253 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TcraP01849 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC4.24□□□□□ -1.73
TcraP01849 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TcraP01849 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TcraP01849 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TcraP01849 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TcraP01849 Gm23550-201ENSMUST00000179003 121 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm25123-201ENSMUST00000179154 121 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm25353-201ENSMUST00000179366 121 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm22992-201ENSMUST00000179496 121 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm25892-201ENSMUST00000179867 121 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm24092-201ENSMUST00000180257 121 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC4.24□□□□□ -1.73
TcraP01849 Gm27601-201ENSMUST00000184794 127 ntBASIC4.24□□□□□ -1.73
TcraP01849 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC4.24□□□□□ -1.73
TcraP01849 Gm18350-201ENSMUST00000187395 955 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm29156-201ENSMUST00000187764 499 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC4.24□□□□□ -1.73
TcraP01849 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC4.24□□□□□ -1.73
TcraP01849 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC4.24□□□□□ -1.73
TcraP01849 Gm29551-201ENSMUST00000190913 698 ntBASIC4.24□□□□□ -1.73
TcraP01849 Ighv8-3-201ENSMUST00000194985 295 ntBASIC4.24□□□□□ -1.73
TcraP01849 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TcraP01849 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC4.24□□□□□ -1.73
TcraP01849 Gm9504-201ENSMUST00000196322 468 ntBASIC4.24□□□□□ -1.73
TcraP01849 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm44361-201ENSMUST00000197960 94 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm8190-201ENSMUST00000199603 586 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC4.24□□□□□ -1.73
TcraP01849 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC4.24□□□□□ -1.73
TcraP01849 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC4.24□□□□□ -1.73
TcraP01849 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC4.24□□□□□ -1.73
TcraP01849 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC4.24□□□□□ -1.73
TcraP01849 AC105407.1-201ENSMUST00000225684 614 ntBASIC4.24□□□□□ -1.73
TcraP01849 AC125405.1-201ENSMUST00000226406 589 ntBASIC4.24□□□□□ -1.73
TcraP01849 AC102676.1-201ENSMUST00000228131 719 ntBASIC4.24□□□□□ -1.73
TcraP01849 AC122937.2-201ENSMUST00000228258 1051 ntBASIC4.24□□□□□ -1.73
TcraP01849 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TcraP01849 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TcraP01849 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
TcraP01849 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TcraP01849 AC156025.2-201ENSMUST00000225907 1533 ntBASIC4.24□□□□□ -1.73
TcraP01849 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
TcraP01849 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC4.24□□□□□ -1.73
TcraP01849 AC122357.3-201ENSMUST00000221260 2293 ntBASIC4.24□□□□□ -1.73
TcraP01849 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
TcraP01849 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.24□□□□□ -1.73
TcraP01849 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TcraP01849 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.24□□□□□ -1.73
TcraP01849 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.23□□□□□ -1.73
TcraP01849 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC4.23□□□□□ -1.73
TcraP01849 Gm9575-201ENSMUST00000122140 1339 ntBASIC4.23□□□□□ -1.73
TcraP01849 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TcraP01849 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TcraP01849 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TcraP01849 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
TcraP01849 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TcraP01849 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TcraP01849 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TcraP01849 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.23□□□□□ -1.73
TcraP01849 Gm9077-201ENSMUST00000210657 2298 ntBASIC4.23□□□□□ -1.73
TcraP01849 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC4.23□□□□□ -1.73
TcraP01849 AC125095.1-201ENSMUST00000228387 2020 ntBASIC4.23□□□□□ -1.73
TcraP01849 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TcraP01849 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.23□□□□□ -1.73
TcraP01849 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TcraP01849 Gm25396-201ENSMUST00000103981 133 ntBASIC4.23□□□□□ -1.73
TcraP01849 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TcraP01849 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC4.23□□□□□ -1.73
TcraP01849 Gm11227-201ENSMUST00000119774 471 ntBASIC4.23□□□□□ -1.73
TcraP01849 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC4.23□□□□□ -1.73
TcraP01849 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TcraP01849 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC4.23□□□□□ -1.73
TcraP01849 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms