Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm23774-201ENSMUST00000158990 131 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm15970-201ENSMUST00000160623 834 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm17907-201ENSMUST00000173150 710 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm29111-201ENSMUST00000188823 696 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm28584-201ENSMUST00000191489 696 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm38138-201ENSMUST00000193274 696 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm37991-201ENSMUST00000194297 696 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm44494-201ENSMUST00000196760 129 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 AC117240.2-201ENSMUST00000220921 263 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 AC116319.2-201ENSMUST00000228159 984 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm23238-201ENSMUST00000083007 164 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm24029-201ENSMUST00000083928 143 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 AC154406.1-201ENSMUST00000215220 2529 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 AC159006.2-201ENSMUST00000228734 4144 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm13259-201ENSMUST00000120792 456 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm12181-201ENSMUST00000121448 531 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm12488-201ENSMUST00000122449 499 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm25227-201ENSMUST00000158204 112 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Olfr331-202ENSMUST00000170501 957 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm29284-201ENSMUST00000188363 255 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm17981-201ENSMUST00000191109 739 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm17775-201ENSMUST00000198542 258 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm44952-201ENSMUST00000204443 433 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm40598-201ENSMUST00000222953 547 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm24405-201ENSMUST00000083033 167 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 AC153152.1-201ENSMUST00000221105 2742 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 AC135083.2-201ENSMUST00000228599 1456 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.28□□□□□ -1.56
Col6a6Q8C6K9 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.56
Col6a6Q8C6K9 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm22272-201ENSMUST00000104039 134 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm22499-201ENSMUST00000104501 135 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm6134-201ENSMUST00000117265 171 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm24359-201ENSMUST00000158418 221 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm27541-201ENSMUST00000184078 122 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Ighv1-3-201ENSMUST00000192764 302 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 983.3 ms