Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm27025-201ENSMUST00000182392 942 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC8.02□□□□□ -1.13
Col18a1P39061 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC8.02□□□□□ -1.13
Col18a1P39061 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC8.02□□□□□ -1.13
Col18a1P39061 Gm18468-201ENSMUST00000207321 369 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm18470-201ENSMUST00000207467 420 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm18465-201ENSMUST00000207468 369 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm18464-201ENSMUST00000207803 420 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm18458-201ENSMUST00000207908 369 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC8.02□□□□□ -1.13
Col18a1P39061 Gm18461-201ENSMUST00000208421 420 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 CT010505.1-201ENSMUST00000227026 396 ntBASIC8.02□□□□□ -1.13
Col18a1P39061 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
Col18a1P39061 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Col18a1P39061 Gm37510-201ENSMUST00000194151 4762 ntBASIC8.01□□□□□ -1.13
Col18a1P39061 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col18a1P39061 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col18a1P39061 Gm44185-201ENSMUST00000204539 3307 ntBASIC8.01□□□□□ -1.13
Col18a1P39061 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col18a1P39061 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col18a1P39061 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col18a1P39061 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC8.01□□□□□ -1.13
Col18a1P39061 Gm11774-201ENSMUST00000118601 293 ntBASIC8.01□□□□□ -1.13
Col18a1P39061 Gm5387-201ENSMUST00000119776 857 ntBASIC8.01□□□□□ -1.13
Col18a1P39061 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Col18a1P39061 Gm21850-201ENSMUST00000179792 359 ntBASIC8.01□□□□□ -1.13
Col18a1P39061 Gm26970-201ENSMUST00000182990 964 ntBASIC8.01□□□□□ -1.13
Col18a1P39061 Gm29640-201ENSMUST00000187972 278 ntBASIC8.01□□□□□ -1.13
Col18a1P39061 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC8.01□□□□□ -1.13
Col18a1P39061 Gm43629-201ENSMUST00000201782 704 ntBASIC8.01□□□□□ -1.13
Col18a1P39061 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC8.01□□□□□ -1.13
Col18a1P39061 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC8.01□□□□□ -1.13
Col18a1P39061 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC8.01□□□□□ -1.13
Col18a1P39061 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Col18a1P39061 AC124729.1-202ENSMUST00000225587 938 ntBASIC8.01□□□□□ -1.13
Col18a1P39061 AC160120.1-201ENSMUST00000227446 663 ntBASIC8.01□□□□□ -1.13
Col18a1P39061 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col18a1P39061 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC8.01□□□□□ -1.13
Col18a1P39061 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col18a1P39061 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col18a1P39061 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Col18a1P39061 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC8.01□□□□□ -1.13
Col18a1P39061 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Col18a1P39061 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Col18a1P39061 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC8□□□□□ -1.13
Col18a1P39061 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col18a1P39061 Gm45537-201ENSMUST00000211539 2708 ntBASIC8□□□□□ -1.13
Col18a1P39061 Gm15877-201ENSMUST00000121897 964 ntBASIC8□□□□□ -1.13
Col18a1P39061 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col18a1P39061 Gm23513-201ENSMUST00000158181 133 ntBASIC8□□□□□ -1.13
Col18a1P39061 Gm35648-201ENSMUST00000202304 475 ntBASIC8□□□□□ -1.13
Col18a1P39061 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col18a1P39061 Gm17984-201ENSMUST00000205286 859 ntBASIC8□□□□□ -1.13
Col18a1P39061 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC8□□□□□ -1.13
Col18a1P39061 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8□□□□□ -1.13
Col18a1P39061 CT030124.1-201ENSMUST00000217130 235 ntBASIC8□□□□□ -1.13
Col18a1P39061 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col18a1P39061 AC154436.2-201ENSMUST00000227408 208 ntBASIC8□□□□□ -1.13
Col18a1P39061 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col18a1P39061 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Col18a1P39061 Gm37370-201ENSMUST00000191996 1410 ntBASIC8□□□□□ -1.13
Col18a1P39061 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Col18a1P39061 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col18a1P39061 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC8□□□□□ -1.13
Col18a1P39061 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC8□□□□□ -1.13
Col18a1P39061 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col18a1P39061 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col18a1P39061 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Col18a1P39061 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col18a1P39061 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col18a1P39061 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col18a1P39061 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC8□□□□□ -1.13
Col18a1P39061 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Col18a1P39061 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Col18a1P39061 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col18a1P39061 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col18a1P39061 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col18a1P39061 Gm28320-201ENSMUST00000187777 2273 ntBASIC8□□□□□ -1.13
Col18a1P39061 Gm14606-201ENSMUST00000117078 1155 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Gm11805-201ENSMUST00000121238 600 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Gm14679-201ENSMUST00000121536 722 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Gm14413-201ENSMUST00000122158 408 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Gm22342-201ENSMUST00000122647 298 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Gm28011-201ENSMUST00000184097 175 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Glud-ps-201ENSMUST00000206310 657 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Gm20786-201ENSMUST00000212649 436 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 CT030182.2-201ENSMUST00000223569 620 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 AC154747.1-201ENSMUST00000225265 239 ntBASIC7.99□□□□□ -1.13
Col18a1P39061 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col18a1P39061 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Col18a1P39061 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms