Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.24□□□□□ -1.57
P20040 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
P20040 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.24□□□□□ -1.57
P20040 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
P20040 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
P20040 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
P20040 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
P20040 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
P20040 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
P20040 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
P20040 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
P20040 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
P20040 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
P20040 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
P20040 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.23□□□□□ -1.57
P20040 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
P20040 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
P20040 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.23□□□□□ -1.57
P20040 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.23□□□□□ -1.57
P20040 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.23□□□□□ -1.57
P20040 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
P20040 Gm24709-201ENSMUST00000104123 132 ntBASIC5.23□□□□□ -1.57
P20040 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.23□□□□□ -1.57
P20040 Gm16007-201ENSMUST00000117837 286 ntBASIC5.23□□□□□ -1.57
P20040 Gm16016-201ENSMUST00000120831 550 ntBASIC5.23□□□□□ -1.57
P20040 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.23□□□□□ -1.57
P20040 Gm23896-201ENSMUST00000158109 130 ntBASIC5.23□□□□□ -1.57
P20040 Gm24363-201ENSMUST00000158440 311 ntBASIC5.23□□□□□ -1.57
P20040 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Gm17137-202ENSMUST00000165729 957 ntBASIC5.23□□□□□ -1.57
P20040 Gm17366-201ENSMUST00000167629 187 ntBASIC5.23□□□□□ -1.57
P20040 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC5.23□□□□□ -1.57
P20040 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.23□□□□□ -1.57
P20040 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.23□□□□□ -1.57
P20040 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC5.23□□□□□ -1.57
P20040 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Gm37581-201ENSMUST00000192371 988 ntBASIC5.23□□□□□ -1.57
P20040 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.23□□□□□ -1.57
P20040 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC5.23□□□□□ -1.57
P20040 Gm18290-201ENSMUST00000202900 844 ntBASIC5.23□□□□□ -1.57
P20040 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.23□□□□□ -1.57
P20040 Gm8863-201ENSMUST00000216630 926 ntBASIC5.23□□□□□ -1.57
P20040 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.23□□□□□ -1.57
P20040 CT030645.3-201ENSMUST00000225483 1022 ntBASIC5.23□□□□□ -1.57
P20040 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.23□□□□□ -1.57
P20040 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.23□□□□□ -1.57
P20040 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
P20040 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.23□□□□□ -1.57
P20040 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
P20040 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.23□□□□□ -1.57
P20040 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.23□□□□□ -1.57
P20040 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
P20040 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
P20040 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
P20040 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
P20040 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.22□□□□□ -1.57
P20040 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.22□□□□□ -1.57
P20040 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
P20040 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.22□□□□□ -1.57
P20040 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
P20040 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.22□□□□□ -1.57
P20040 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.22□□□□□ -1.57
P20040 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
P20040 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
P20040 Gm22371-201ENSMUST00000104588 130 ntBASIC5.22□□□□□ -1.57
P20040 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
P20040 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.22□□□□□ -1.57
P20040 Gm13114-201ENSMUST00000117605 106 ntBASIC5.22□□□□□ -1.57
P20040 Gm13578-201ENSMUST00000120849 590 ntBASIC5.22□□□□□ -1.57
P20040 Gm6541-201ENSMUST00000165542 561 ntBASIC5.22□□□□□ -1.57
P20040 Gm23631-201ENSMUST00000175291 123 ntBASIC5.22□□□□□ -1.57
P20040 Gm20778-201ENSMUST00000178524 627 ntBASIC5.22□□□□□ -1.57
P20040 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
P20040 Gm17934-201ENSMUST00000192818 422 ntBASIC5.22□□□□□ -1.57
P20040 Gm37758-201ENSMUST00000194275 629 ntBASIC5.22□□□□□ -1.57
P20040 Gm43467-201ENSMUST00000197441 437 ntBASIC5.22□□□□□ -1.57
P20040 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.22□□□□□ -1.57
P20040 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.22□□□□□ -1.57
P20040 Gm18467-201ENSMUST00000208805 434 ntBASIC5.22□□□□□ -1.57
P20040 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
P20040 Gm4032-201ENSMUST00000210886 487 ntBASIC5.22□□□□□ -1.57
P20040 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms