Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Ap3m1-206ENSMUST00000154460 6732 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm32158-201ENSMUST00000200135 404 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Trpm1-218ENSMUST00000206277 5076 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm37593-201ENSMUST00000191669 3254 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 AC154141.1-201ENSMUST00000208403 4136 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm27564-201ENSMUST00000185196 96 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm5511-201ENSMUST00000189380 802 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm45525-201ENSMUST00000210800 389 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm6884-201ENSMUST00000119318 615 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm4911-201ENSMUST00000119388 945 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm13808-201ENSMUST00000121353 184 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm25066-201ENSMUST00000158145 123 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm25865-201ENSMUST00000158247 104 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm22411-201ENSMUST00000175462 126 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm22002-201ENSMUST00000175622 125 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm8719-201ENSMUST00000203602 534 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Col6a3E9PWQ3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm28583-201ENSMUST00000188903 2141 ntBASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm24581-201ENSMUST00000103962 133 ntBASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm22276-201ENSMUST00000122469 129 ntBASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm28304-201ENSMUST00000185977 312 ntBASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm28066-201ENSMUST00000188657 472 ntBASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm29256-201ENSMUST00000189094 312 ntBASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm28484-201ENSMUST00000190606 312 ntBASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm10145-201ENSMUST00000077776 462 ntBASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Snora30-201ENSMUST00000083325 130 ntBASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm28859-201ENSMUST00000186650 616 ntBASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm9443-201ENSMUST00000188406 816 ntBASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a3E9PWQ3 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms