Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gm9278-201ENSMUST00000205508 553 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gm10064-201ENSMUST00000071235 399 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gm23330-201ENSMUST00000082660 164 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 n-R5s46-201ENSMUST00000083960 116 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1aA2APX8 AC153959.1-201ENSMUST00000213617 1694 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1aA2APX8 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gm28507-201ENSMUST00000189737 703 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gm43148-201ENSMUST00000198237 520 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gm43973-201ENSMUST00000203562 210 ntBASIC6.08□□□□□ -1.44
Scn1aA2APX8 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1aA2APX8 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1aA2APX8 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Scn1aA2APX8 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.07□□□□□ -1.44
Scn1aA2APX8 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.07□□□□□ -1.44
Scn1aA2APX8 Gm7680-201ENSMUST00000216198 1348 ntBASIC6.07□□□□□ -1.44
Scn1aA2APX8 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.07□□□□□ -1.44
Scn1aA2APX8 Gm22370-201ENSMUST00000102422 83 ntBASIC6.07□□□□□ -1.44
Scn1aA2APX8 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Gm22499-201ENSMUST00000104501 135 ntBASIC6.07□□□□□ -1.44
Scn1aA2APX8 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.07□□□□□ -1.44
Scn1aA2APX8 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Gm23279-201ENSMUST00000157912 97 ntBASIC6.07□□□□□ -1.44
Scn1aA2APX8 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Gm6808-201ENSMUST00000162341 807 ntBASIC6.07□□□□□ -1.44
Scn1aA2APX8 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Gm37072-201ENSMUST00000194570 837 ntBASIC6.07□□□□□ -1.44
Scn1aA2APX8 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.07□□□□□ -1.44
Scn1aA2APX8 Gm5735-201ENSMUST00000207053 167 ntBASIC6.07□□□□□ -1.44
Scn1aA2APX8 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.07□□□□□ -1.44
Scn1aA2APX8 AC122332.1-201ENSMUST00000214384 285 ntBASIC6.07□□□□□ -1.44
Scn1aA2APX8 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.07□□□□□ -1.44
Scn1aA2APX8 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Scn1aA2APX8 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.07□□□□□ -1.44
Scn1aA2APX8 Gm5321-201ENSMUST00000072050 447 ntBASIC6.07□□□□□ -1.44
Scn1aA2APX8 Gm22807-201ENSMUST00000082737 129 ntBASIC6.07□□□□□ -1.44
Scn1aA2APX8 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Scn1aA2APX8 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1aA2APX8 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.06□□□□□ -1.44
Scn1aA2APX8 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Scn1aA2APX8 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Scn1aA2APX8 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Scn1aA2APX8 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.06□□□□□ -1.44
Scn1aA2APX8 Gm13245-201ENSMUST00000119646 260 ntBASIC6.06□□□□□ -1.44
Scn1aA2APX8 Gm7079-201ENSMUST00000119726 171 ntBASIC6.06□□□□□ -1.44
Scn1aA2APX8 Gm14998-201ENSMUST00000120502 495 ntBASIC6.06□□□□□ -1.44
Scn1aA2APX8 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC6.06□□□□□ -1.44
Scn1aA2APX8 Gm24719-201ENSMUST00000157520 110 ntBASIC6.06□□□□□ -1.44
Scn1aA2APX8 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Scn1aA2APX8 Gm29736-201ENSMUST00000198189 385 ntBASIC6.06□□□□□ -1.44
Scn1aA2APX8 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn1aA2APX8 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn1aA2APX8 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn1aA2APX8 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.06□□□□□ -1.44
Scn1aA2APX8 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.06□□□□□ -1.44
Scn1aA2APX8 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Scn1aA2APX8 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scn1aA2APX8 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Scn1aA2APX8 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.06□□□□□ -1.44
Scn1aA2APX8 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scn1aA2APX8 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.06□□□□□ -1.44
Scn1aA2APX8 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scn1aA2APX8 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Scn1aA2APX8 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Scn1aA2APX8 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms