Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.28□□□□□ -1.4
Ndc1Q8VCB1 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm9836-201ENSMUST00000117132 216 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm12225-201ENSMUST00000117995 298 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm14007-201ENSMUST00000118288 210 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm14848-201ENSMUST00000121850 467 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm25717-201ENSMUST00000158631 353 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Ear-ps10-201ENSMUST00000161871 460 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm23968-201ENSMUST00000175047 125 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm38061-201ENSMUST00000192490 365 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm37433-201ENSMUST00000192695 678 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm37441-201ENSMUST00000194430 678 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm3544-201ENSMUST00000196129 305 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm29784-201ENSMUST00000196217 406 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm35212-201ENSMUST00000196672 606 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm7413-201ENSMUST00000219498 462 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm18620-201ENSMUST00000222295 324 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Mir465-201ENSMUST00000093563 74 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.27□□□□□ -1.41
Ndc1Q8VCB1 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ndc1Q8VCB1 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ndc1Q8VCB1 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ndc1Q8VCB1 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Ndc1Q8VCB1 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Ndc1Q8VCB1 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.26□□□□□ -1.41
Ndc1Q8VCB1 Gm13983-201ENSMUST00000118018 865 ntBASIC6.26□□□□□ -1.41
Ndc1Q8VCB1 Gm15616-201ENSMUST00000118662 375 ntBASIC6.26□□□□□ -1.41
Ndc1Q8VCB1 Gm14975-201ENSMUST00000118741 664 ntBASIC6.26□□□□□ -1.41
Ndc1Q8VCB1 Gm4914-201ENSMUST00000119757 459 ntBASIC6.26□□□□□ -1.41
Ndc1Q8VCB1 Gm15019-201ENSMUST00000120148 434 ntBASIC6.26□□□□□ -1.41
Ndc1Q8VCB1 Gm12825-201ENSMUST00000120249 563 ntBASIC6.26□□□□□ -1.41
Ndc1Q8VCB1 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms