Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Gm26144-201ENSMUST00000104475 132 ntBASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Gm26146-201ENSMUST00000104478 185 ntBASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Gm22499-201ENSMUST00000104501 135 ntBASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Gm13899-201ENSMUST00000121519 1255 ntBASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Gm12494-201ENSMUST00000121684 521 ntBASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Gm12293-201ENSMUST00000121898 590 ntBASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Gm23903-201ENSMUST00000157566 131 ntBASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Gm23386-201ENSMUST00000158585 144 ntBASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Gm18467-201ENSMUST00000208805 434 ntBASIC6.01□□□□□ -1.45
Trub1Q8C0D0 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 AC122393.2-201ENSMUST00000226404 1093 ntBASIC6.01□□□□□ -1.45
Trub1Q8C0D0 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Trub1Q8C0D0 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6□□□□□ -1.45
Trub1Q8C0D0 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trub1Q8C0D0 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trub1Q8C0D0 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
Trub1Q8C0D0 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trub1Q8C0D0 Gm18508-201ENSMUST00000215790 1642 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Gm43485-201ENSMUST00000199292 1710 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6□□□□□ -1.45
Trub1Q8C0D0 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Trub1Q8C0D0 Gm23739-201ENSMUST00000102295 108 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Gm14529-201ENSMUST00000117894 406 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Gm15781-201ENSMUST00000120216 323 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Gm15877-201ENSMUST00000121897 964 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trub1Q8C0D0 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6□□□□□ -1.45
Trub1Q8C0D0 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trub1Q8C0D0 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6□□□□□ -1.45
Trub1Q8C0D0 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trub1Q8C0D0 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6□□□□□ -1.45
Trub1Q8C0D0 Gm16102-201ENSMUST00000160955 420 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Gm22650-201ENSMUST00000175138 105 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6□□□□□ -1.45
Trub1Q8C0D0 Gm19087-201ENSMUST00000191430 946 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6□□□□□ -1.45
Trub1Q8C0D0 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6□□□□□ -1.45
Trub1Q8C0D0 Gm42886-201ENSMUST00000199214 466 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC6□□□□□ -1.45
Trub1Q8C0D0 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Gm5735-201ENSMUST00000207053 167 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6□□□□□ -1.45
Trub1Q8C0D0 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 AC154718.1-201ENSMUST00000226676 250 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trub1Q8C0D0 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trub1Q8C0D0 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6□□□□□ -1.45
Trub1Q8C0D0 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trub1Q8C0D0 Gm37775-201ENSMUST00000194120 2313 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Gm37880-201ENSMUST00000192216 3257 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Trub1Q8C0D0 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trub1Q8C0D0 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Trub1Q8C0D0 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trub1Q8C0D0 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trub1Q8C0D0 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Trub1Q8C0D0 Gm38036-201ENSMUST00000194586 3564 ntBASIC6□□□□□ -1.45
Trub1Q8C0D0 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Trub1Q8C0D0 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms