Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm23721-201ENSMUST00000083005 107 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Mterf4-203ENSMUST00000112944 3097 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim35Q8C006 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm44178-201ENSMUST00000205229 2930 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm37367-201ENSMUST00000191771 2602 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm42537-201ENSMUST00000198260 2574 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim35Q8C006 Lypd6b-201ENSMUST00000028103 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm44068-201ENSMUST00000204049 2128 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 D830032E09Rik-203ENSMUST00000189845 2092 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim35Q8C006 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC8.92□□□□□ -0.98
Trim35Q8C006 AL670757.1-201ENSMUST00000223668 1959 ntBASIC8.92□□□□□ -0.98
Trim35Q8C006 Gm20775-201ENSMUST00000100115 1851 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Usp7-208ENSMUST00000161046 4003 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 AC117769.3-201ENSMUST00000225814 1664 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm9700-201ENSMUST00000193786 1617 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm42595-201ENSMUST00000196771 1607 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Ifih1-202ENSMUST00000112459 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC8.91□□□□□ -0.98
Trim35Q8C006 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim35Q8C006 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 CT025645.1-201ENSMUST00000222760 4322 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 Gmfb-202ENSMUST00000111817 4171 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 St6gal1-206ENSMUST00000178797 4177 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim35Q8C006 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 Gmfb-201ENSMUST00000079314 4171 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim35Q8C006 Osgepl1-202ENSMUST00000114484 2283 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm7933-201ENSMUST00000191215 2255 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Sdhaf2-201ENSMUST00000025570 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 Mir675-201ENSMUST00000102320 84 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm12255-201ENSMUST00000117184 284 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm12448-201ENSMUST00000118852 655 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm8814-201ENSMUST00000119072 535 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm12192-201ENSMUST00000120146 487 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm8682-201ENSMUST00000121310 498 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm15342-201ENSMUST00000146222 2100 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm23209-201ENSMUST00000158667 110 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm7953-201ENSMUST00000168278 469 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm8974-201ENSMUST00000175770 479 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Tpd52-ps-201ENSMUST00000178097 523 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Rps10-208ENSMUST00000178774 498 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm2076-201ENSMUST00000182524 971 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm35013-201ENSMUST00000197218 832 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm43139-201ENSMUST00000199914 284 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm15738-205ENSMUST00000210378 1051 ntTSL 5 BASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm4898-201ENSMUST00000218519 832 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 AC158803.1-201ENSMUST00000219495 316 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 AC105950.2-201ENSMUST00000220938 368 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 AC132468.1-201ENSMUST00000224706 499 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 AC158519.1-201ENSMUST00000228615 179 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Tnp1-201ENSMUST00000027374 437 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 n-R5s92-201ENSMUST00000082810 119 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Mir25-201ENSMUST00000083460 84 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 Wdpcp-201ENSMUST00000020568 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 AC154461.2-201ENSMUST00000225462 1980 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.91□□□□□ -0.98
Trim35Q8C006 CT010577.1-202ENSMUST00000226187 1903 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Anpep-201ENSMUST00000049004 3422 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 AC124446.1-201ENSMUST00000221027 2644 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm37593-201ENSMUST00000191669 3254 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm45117-201ENSMUST00000207250 1774 ntBASIC8.91□□□□□ -0.98
Trim35Q8C006 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim35Q8C006 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim35Q8C006 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trim35Q8C006 Galnt7-201ENSMUST00000034021 4313 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 Pygl-202ENSMUST00000161083 2992 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim35Q8C006 Ablim1-205ENSMUST00000111526 2164 ntTSL 5 BASIC8.9□□□□□ -0.98
Trim35Q8C006 8030453O22Rik-202ENSMUST00000135363 1506 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trim35Q8C006 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Trim35Q8C006 Aqp9-201ENSMUST00000060917 2643 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trim35Q8C006 Aqp9-202ENSMUST00000074465 2646 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim35Q8C006 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim35Q8C006 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Trim35Q8C006 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim35Q8C006 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm7444-201ENSMUST00000217455 2428 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Trim35Q8C006 Ddr2-201ENSMUST00000027985 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim35Q8C006 Gigyf2-217ENSMUST00000174501 3876 ntAPPRIS P3 TSL 5 BASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm38249-201ENSMUST00000192560 2321 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm12079-201ENSMUST00000112483 244 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm9599-201ENSMUST00000117473 481 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm14534-201ENSMUST00000120045 357 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm12369-201ENSMUST00000121343 942 ntBASIC8.9□□□□□ -0.98
Trim35Q8C006 Gm14514-201ENSMUST00000121680 940 ntBASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 150.6 ms